RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KLHL4Q9C0H6 718 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 NDST4Q9H3R1 872 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 PCDH9Q9HC56 1237 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 GPR108Q9NPR9 543 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 GIMAP4Q9NUV9 329 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 ARGLU1Q9NWB6 273 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 TTC7AQ9ULT0 858 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 A4GNTQ9UNA3 340 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 ERVK-11Q9UQG0 969 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 AMDHD2Q9Y303 409 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 LSM4Q9Y4Z0 139 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 NDUFS3O75489 264 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 GGPS1O95749 300 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 G6PDP11413 515 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 EDN2P20800 178 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 USP8P40818 1118 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 TMPOP42166 694 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 MSH2P43246 934 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 TNNT3P45378 269 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 LIG4P49917 911 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 MFAP4P55083 255 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 CEBPZQ03701 1054 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 GRIK3Q13003 919 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 COG2Q14746 738 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 GARNL3Q5VVW2 1013 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 ARHGAP17Q68EM7 881 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 TRNP1Q6NT89 227 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 SHQ1Q6PI26 577 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 KCTD18Q6PI47 426 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 LCTLQ6UWM7 567 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 MTSS1LQ765P7 747 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 SLC9B2Q86UD5 537 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 NFE4Q86UQ8 179 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 NOXA1Q86UR1 476 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 SNX32Q86XE0 403 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 DNAAF5Q86Y56 855 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 TDRPQ86YL5 185 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 POGLUT1Q8NBL1 392 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 DMBX1Q8NFW5 382 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 GSDMBQ8TAX9 411 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 MOAP1Q96BY2 351 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 CCDC34Q96HJ3 373 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 IFIH1Q9BYX4 1025 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 POLR1BQ9H9Y6 1135 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 KIF9Q9HAQ2 790 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 PFDN4Q9NQP4 134 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 ABCF3Q9NUQ8 709 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 HSPB7Q9UBY9 170 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 RASAL2Q9UJF2 1139 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 INTS6Q9UL03 887 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 NENFQ9UMX5 172 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 AAR2Q9Y312 384 aaKnown RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 STON1Q9Y6Q2 735 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 CAPN7Q9Y6W3 813 aa4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 SOS1Q07889 1333 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC13-209ENST00000508304 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 hCG_1809904A0A1W2PP81 198 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 A0A1W2PPE2 198 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 A0A1W2PR64 198 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 LILRA5A6NI73 299 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 UTYO14607 1347 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 HS6ST1O60243 411 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 ENTPD3O75355 529 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC25A12O75746 678 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 PGM3O95394 542 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SCG2P13521 617 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 UBA7P41226 1012 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC15A1P46059 708 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 FMO5P49326 533 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 METAP2P50579 478 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 STAT2P52630 851 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 GALCP54803 685 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SORDQ00796 357 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 PPARDQ03181 441 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SREBF2Q12772 1141 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 RNPS1Q15287 305 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 NAB2Q15742 525 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 TCP11X2Q5H9J9 407 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 KCNT1Q5JUK3 1230 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 CCDC91Q7Z6B0 441 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 DNAJB7Q7Z6W7 309 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 DHX40Q8IX18 779 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SCML4Q8N228 414 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 ZBTB2Q8N680 514 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 SYT2Q8N9I0 419 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 PRPF31Q8WWY3 499 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 RND1Q92730 232 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 PGAM5Q96HS1 289 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 C1orf74Q96LT6 269 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 JAKMIP1Q96N16 626 aaKnown RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 GCNAQ96QF7 691 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 HAUS8Q9BT25 410 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 DCTN5Q9BTE1 182 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 ERVMER34-1Q9H9K5 563 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 MKKSQ9NPJ1 570 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 KLHL1Q9NR64 748 aa4.08□□□□□ -1.76
TRAPPC13-209ENST00000508304 C1RLQ9NZP8 487 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms