RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 HYLS1Q96M11 299 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 LHPPQ9H008 270 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 BLZF1Q9H2G9 400 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 RHBGQ9H310 441 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PDZD7Q9H5P4 517 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ZCCHC4Q9H5U6 513 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PIF1Q9H611 641 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 AGO3Q9H9G7 860 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ARNT2Q9HBZ2 717 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TLR9Q9NR96 1032 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 OLA1Q9NTK5 396 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 KIF25Q9UIL4 384 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PURGQ9UJV8 347 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PCDHGA9Q9Y5G4 932 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PNMA8CA0A1B0GUJ8 204 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L5A8MUK1 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L15C9J2P7 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L12C9JPN9 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L11C9JVI0 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L21D6R901 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L18D6R9N7 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L22D6RA61 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L19D6RCP7 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L20D6RJB6 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 H0YAE9 185 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 DLGAP1O14490 977 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF213O14771 459 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ENTPD3O75355 529 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TMEM63AO94886 807 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 FCER2P06734 321 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 POLBP06746 335 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ASGR1P07306 291 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ITGAMP11215 1152 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 TGM2P21980 687 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 NT5C2P49902 561 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 FGL1Q08830 312 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP17L24Q0WX57 530 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 GRB7Q14451 532 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PTPRRQ15256 657 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 NEDD8Q15843 81 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 NRF1Q16656 503 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 AAK1Q2M2I8 961 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 COL28A1Q2UY09 1125 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 EFCAB12Q6NXP0 572 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 XRRA1Q6P2D8 792 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 USP53Q70EK8 1073 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 CHSY3Q70JA7 882 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 CENPLQ8N0S6 344 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 KDF1Q8NAX2 398 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 CAMKVQ8NCB2 501 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 GLB1L3Q8NCI6 653 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 RNASE11Q8TAA1 199 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 RNF139Q8WU17 664 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF668Q96K58 619 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 UBXN10Q96LJ8 280 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 EYA3Q99504 573 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 BTBD1Q9H0C5 482 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PLCXD1Q9NUJ7 323 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 EVA1BQ9NVM1 165 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 BABAM1Q9NWV8 329 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SIRPGQ9P1W8 387 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 PIM2Q9P1W9 311 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 ASH2LQ9UBL3 628 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 OSGIN1Q9UJX0 560 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 CRYL1Q9Y2S2 319 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SESN1Q9Y6P5 492 aa10.72□□□□□ -0.69
PDLIM5-210ENST00000508216 SPATA31A6Q5VVP1 1343 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 MEIOCA2RUB1 952 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 RRN3P2A6NIE6 340 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 H7C2Y5 167 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 GPR171O14626 319 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 CHMP2AO43633 222 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 PEX10O60683 326 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 TNFRSF21O75509 655 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 TDP2O95551 362 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ARP10275 920 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 EDN3P14138 238 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF8P17098 575 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 WARSP23381 471 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ACVR2AP27037 513 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 POU1F1P28069 291 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 SLC7A1P30825 629 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 CD79BP40259 229 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ALDH9A1P49189 494 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 PRMT2P55345 433 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 RHDQ02161 417 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 GRB10Q13322 594 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 SWI5Q1ZZU3 235 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 TEX44Q53QW1 395 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ARMCX4Q5H9R4 360 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 NOMO2Q5JPE7 1267 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ZNF852Q6ZMS4 543 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 IRF2BP2Q7Z5L9 587 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 CRLF3Q8IUI8 442 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 EMC1Q8N766 993 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms