RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ARID3BQ8IVW6 561 aaPredicted RBP2.77□□□□□ -1.97
GYPB-207ENST00000506679 SLC5A8Q8N695 610 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 OR52I2Q8NH67 350 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 CD101Q93033 1021 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 PHF21AQ96BD5 680 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 CEP295NLQ96MC4 621 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 SMC6Q96SB8 1091 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 SEMA3CQ99985 751 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 MMP28Q9H239 520 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 SMARCAD1Q9H4L7 1026 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ZFP57Q9NU63 452 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 TCP11L1Q9NUJ3 509 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 HAUS2Q9NVX0 235 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 NSMCE4AQ9NXX6 385 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 GAGE2DQ9UEU5 116 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 POLG2Q9UHN1 485 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 VPS28Q9UK41 221 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ICAM5Q9UMF0 924 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 B3GALT5Q9Y2C3 310 aa2.77□□□□□ -1.97
GYPB-207ENST00000506679 ASTN2O75129 1339 aaPredicted RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 OR2M5A3KFT3 312 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 OR2A25A4D2G3 310 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 C16orf97H3BN30 126 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 J3QR06 171 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 BUD23O43709 281 aaKnown RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 SYNGR3O43761 229 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 PDE9AO76083 593 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 ZNF432O94892 652 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 PGM3O95394 542 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 IGHV4-39P01824 125 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 UMODP07911 640 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 CSH1P0DML2 217 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 CSH2P0DML3 217 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 MMP9P14780 707 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 NR1D1P20393 614 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 ACSL1P33121 698 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 IL15P40933 162 aaPredicted RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 SLC15A1P46059 708 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 SUOXP51687 545 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 CUL4AQ13619 759 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 MEP1AQ16819 746 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 ACCSLQ4AC99 568 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 C9orf50Q5SZB4 431 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 IRAK1BP1Q5VVH5 260 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 FAM171BQ6P995 826 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 PLXDC2Q6UX71 529 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 ZNF852Q6ZMS4 543 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 GALNT5Q7Z7M9 940 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 NR2C2APQ86WQ0 139 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 C1orf52Q8N6N3 182 aaKnown RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 MAB21L3Q8N8X9 362 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 RBM15BQ8NDT2 890 aaKnown RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 GSDMBQ8TAX9 411 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 MOAP1Q96BY2 351 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 HES6Q96HZ4 224 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 RSRC1Q96IZ7 334 aaKnown RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 HGH1Q9BTY7 390 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 PPIL3Q9H2H8 161 aaKnown RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 LRMDAQ9H2I8 198 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 HRH4Q9H3N8 390 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 MARCH4Q9P2E8 410 aaPredicted RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 ZNF215Q9UL58 517 aaPredicted RBP2.76□□□□□ -1.97
GYPB-207ENST00000506679 SMCHD1A6NHR9 2005 aa2.76□□□□□ -1.97
GYPB-207ENST00000506679 CNTNAP2Q9UHC6 1331 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 A0A0G2JNG1 304 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 A0A1W2PQ09 198 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 hCG_1807616A0A1W2PRN6 198 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 FAM172BPA6NC97 362 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 TMEM189-UBE2V1I3L0A0 370 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 P2RY10O00398 339 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 DVL1O14640 695 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 CAPN9O14815 690 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 GFPT2O94808 682 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 GCNT3O95395 438 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 CETPP11597 493 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 CSF2RAP15509 400 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 PAX1P15863 534 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 FMO5P49326 533 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 HOXA1P49639 335 aaPredicted RBP2.75□□□□□ -1.97
GYPB-207ENST00000506679 MFAP4P55083 255 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 LMOD3Q0VAK6 560 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 UBE2V1Q13404 147 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 KCNC3Q14003 757 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 KIR2DS5Q14953 304 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 WTAPQ15007 396 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 RBBP5Q15291 538 aaKnown RBP2.75□□□□□ -1.97
GYPB-207ENST00000506679 DLG2Q15700 870 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 SIRPB2Q5JXA9 342 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 CCNYL2Q5T2Q4 361 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 KRT79Q5XKE5 535 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 C19orf48Q6RUI8 117 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 KCTD8Q6ZWB6 473 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 MARK2Q7KZI7 788 aaKnown RBP2.75□□□□□ -1.97
GYPB-207ENST00000506679 PCGF5Q86SE9 256 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 TMTC2Q8N394 836 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 LMNTD1Q8N9Z9 388 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 SLC24A4Q8NFF2 622 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 SMPDL3BQ92485 455 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 LINGO1Q96FE5 620 aa2.75□□□□□ -1.97
GYPB-207ENST00000506679 SCRN2Q96FV2 425 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms