RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ST14Q9Y5Y6 855 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 ZFHX4Q86UP3 3567 aa13.09□□□□□ -0.31
PDLIM7-212ENST00000504380 IGLV3-16A0A075B6K0 115 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 UBA6A0AVT1 1052 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 C4orf47A7E2U8 309 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 IQCF5A8MTL0 148 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 CXorf49A8MYA2 514 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 CHUKO15111 745 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 FFAR2O15552 330 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 NDUFS3O75489 264 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 S1PR4O95977 384 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 CTSEP14091 401 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 ATP1B2P14415 290 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 ITGB6P18564 788 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 DGKAP23743 735 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 EPHA8P29322 1005 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 FMO4P31512 558 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 RXRGP48443 463 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 CTBSQ01459 385 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.321e-7■■■□□ 15.8
PDLIM7-212ENST00000504380 TEDDM1Q5T9Z0 273 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 LYPLAL1Q5VWZ2 237 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 MRNIPQ6NTE8 343 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 NAPRTQ6XQN6 538 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 SDCCAG8Q86SQ7 713 aaPredicted RBP13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 LRRTM4Q86VH4 590 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 NRROSQ86YC3 692 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 CILP2Q8IUL8 1156 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 SLC25A45Q8N413 288 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 LKAAEAR1Q8TD35 194 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 FBF1Q8TES7 1133 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 PARD6BQ9BYG5 372 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 PHACTR1Q9C0D0 580 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 MOCS1Q9NZB8 636 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 FBXO5Q9UKT4 447 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 KCNK6Q9Y257 313 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 DNAJC16Q9Y2G8 782 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 CRYL1Q9Y2S2 319 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 DGKBQ9Y6T7 804 aa13.08□□□□□ -0.32
PDLIM7-212ENST00000504380 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TCRBV9S1A1TA0A576 114 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 H3BM21 787 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 AQP9O43315 295 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 POP7O75817 140 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 HAUS5O94927 633 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 ACSL3O95573 720 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 RALBP11234 206 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 ZNF7P17097 686 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 GABRB3P28472 473 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 ARRB1P49407 418 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TTPAP49638 278 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 CCT8P50990 548 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 EIF3BP55884 814 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 HNRNPKP61978 463 aaKnown RBP eCLIP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TUBB4BP68371 445 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 MGAT5Q09328 741 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 ITIH4Q14624 930 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TYSND1Q2T9J0 566 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 DEFB133Q30KQ1 61 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 AARS2Q5JTZ9 985 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 CNSTQ6PJW8 725 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 CERS6Q6ZMG9 384 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TAF8Q7Z7C8 310 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 C11orf96Q7Z7L8 435 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 SFTPA2Q8IWL1 248 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 KRT222Q8N1A0 295 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 OXR1Q8N573 874 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 ZNF548Q8NEK5 533 aaPredicted RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 SAP25Q8TEE9 199 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 LPGAT1Q92604 370 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TTC1Q99614 292 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 ZCCHC2Q9C0B9 1178 aaKnown RBP13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 RMI1Q9H9A7 625 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TMEM9BQ9NQ34 198 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 SPASTQ9UBP0 616 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 PSAT1Q9Y617 370 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
PDLIM7-212ENST00000504380 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 KMOO15229 486 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 SNX2O60749 519 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 C1QAP02745 245 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 MYF5P13349 255 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 OGNP20774 298 aaKnown RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 NSG1P42857 185 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 BLKP51451 505 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 PMS2P54278 862 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 INSCQ1MX18 579 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 CTSL3PQ5NE16 218 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 STPG1Q5TH74 334 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 ZNF549Q6P9A3 640 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 SLC30A9Q6PML9 568 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 PACS1Q6VY07 963 aa13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 FAM83HQ6ZRV2 1179 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 LILRA3Q8N6C8 439 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 C2CD4AQ8NCU7 369 aaPredicted RBP13.06□□□□□ -0.32
PDLIM7-212ENST00000504380 CALML6Q8TD86 181 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms