RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ARHGAP31Q2M1Z3 1444 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MIA2Q96PC5 1412 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TNIKQ9UKE5 1360 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MYO3BQ8WXR4 1341 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATXN2Q99700 1313 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 C17orf113A0A1B0GUU1 675 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 A0A1W2PS18 150 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRD1A4D1F6 860 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 A6NCN8 305 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM90A20PA6NIJ5 464 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PI4K2BG5E9Z4 385 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 L7N2F9 121 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NDUFAB1O14561 156 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 WNT9BO14905 357 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 HOXC11O43248 304 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 HSPA12AO43301 675 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 STX6O43752 255 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 RANBP6O60518 1105 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 USO1O60763 962 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SMIM24O75264 130 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATP6V1G1O75348 118 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZNF189O75820 626 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PENKP01210 267 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PRSS1P07477 247 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC166P0CW27 439 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 HSPA8P11142 646 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PCP11498 1178 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 HSD3B1P14060 373 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 GLULP15104 373 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TNFAIP3P21580 790 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 S100A1P23297 94 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MARK3P27448 753 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PDIA3P30101 505 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TIMP3P35625 211 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRIM23P36406 574 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NR0B1P51843 470 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NEK3P51956 506 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 FUT6P51993 359 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARSFP54793 590 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 HNRNPH2P55795 449 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 B2MP61769 119 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TPM4P67936 248 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC18A2Q05940 514 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NCBP1Q09161 790 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NONOQ15233 471 aaKnown RBP eCLIP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SNCBQ16143 134 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PFKFB4Q16877 469 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 AMZ1Q400G9 498 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC153Q494R4 210 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ANKDD1AQ495B1 522 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCDC40Q4G0X9 1142 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 FBXO43Q4G163 708 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ODF2Q5BJF6 829 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 RNASEH2BQ5TBB1 312 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CYP4A22Q5TCH4 519 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 IRAK1BP1Q5VVH5 260 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 METTL11BQ5VVY1 283 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SPINK14Q6IE38 97 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PGBD2Q6P3X8 592 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CNSTQ6PJW8 725 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CCNI2Q6ZMN8 369 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 C1orf122Q6ZSJ8 110 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TOGARAM2Q6ZUX3 1019 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PLEKHM3Q6ZWE6 761 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ATG9AQ7Z3C6 839 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARHGAP22Q7Z5H3 698 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 GALNT5Q7Z7M9 940 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SLC9B2Q86UD5 537 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NKAIN4Q8IVV8 208 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 FAM186BQ8IYM0 893 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 LSMEM1Q8N8F7 131 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SYT2Q8N9I0 419 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 DENND6BQ8NEG7 585 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR52K1Q8NGK4 314 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 OR8K3Q8NH51 312 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 KIF18AQ8NI77 898 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ARRDC2Q8TBH0 407 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MAGEC3Q8TD91 643 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CREB3L4Q8TEY5 395 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 HVCN1Q96D96 273 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 RBM18Q96H35 190 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CEP19Q96LK0 163 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 CATSPER2Q96P56 530 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 MTMR9Q96QG7 549 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 SMC6Q96SB8 1091 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 RMDN3Q96TC7 470 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ELAC2Q9BQ52 826 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 KIFC3Q9BVG8 833 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 LSG1Q9H089 658 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 LMAN2LQ9H0V9 348 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRPV6Q9H1D0 765 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ZWILCHQ9H900 591 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PSTPIP2Q9H939 334 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 TRPV4Q9HBA0 871 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 PARVBQ9HBI1 364 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 LRRC4Q9HBW1 653 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 NOX4Q9NPH5 578 aa2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 DDX4Q9NQI0 724 aaKnown RBP2.02□□□□□ -2.09
HMGB3P17-201ENST00000504195 ENTPD7Q9NQZ7 604 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms