RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 RPL10P27635 214 aaKnown RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 CSF2RBP32927 897 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 CTNNA1P35221 906 aaKnown RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A3P35503 534 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 SPAM1P38567 509 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 MARCKSL1P49006 195 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 CSRP3P50461 194 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 RAB15P59190 212 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 ITGA9Q13797 1035 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 CHRNA6Q15825 494 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 ABRAXAS1Q6UWZ7 409 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 TMEM26Q6ZUK4 368 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 ARHGAP22Q7Z5H3 698 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 AMZ2Q86W34 360 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 TRAPPC5Q8IUR0 188 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 TXLNBQ8N3L3 684 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 IL22RA1Q8N6P7 574 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 ACTL9Q8TC94 416 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 ZNF398Q8TD17 642 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 JPH3Q8WXH2 748 aaPredicted RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 LRRC45Q96CN5 670 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 QKIQ96PU8 341 aaKnown RBP eCLIP11.77□□□□□ -0.53
MED28-203ENST00000503945 TEFMQ96QE5 360 aaKnown RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 ZPBPQ9BS86 351 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 TIMM29Q9BSF4 260 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 OSBPL8Q9BZF1 889 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A7Q9HAW7 530 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A10Q9HAW8 530 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 UGT1A8Q9HAW9 530 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 WASH6PQ9NQA3 447 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 FBXO8Q9NRD0 319 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 STARD5Q9NSY2 213 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 KLHL3Q9UH77 587 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 B3GALT1Q9Y5Z6 326 aa11.77□□□□□ -0.53
MED28-203ENST00000503945 DNMT3AQ9Y6K1 912 aaPredicted RBP11.77□□□□□ -0.53
MED28-203ENST00000503945 GLYATL1P3A0A0U1RQE8 302 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 RCCD1A6NED2 376 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 C5orf60A6NFR6 353 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 POP7O75817 140 aaKnown RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 UBXN7O94888 489 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 ITGB2P05107 769 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 RBP3P10745 1247 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 WT1P19544 449 aaPredicted RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 LPOP22079 712 aaPredicted RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 SLC19A1P41440 591 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 HALP42357 657 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 CHRNA4P43681 627 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 EIF3EP60228 445 aaKnown RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 MC2RQ01718 297 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 OTUD4Q01804 1114 aaKnown RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 NOMO1Q15155 1222 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 SEPT7Q16181 437 aaKnown RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 PLA2G4EQ3MJ16 856 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 ANKRD20A2Q5SQ80 823 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 ANKRD20A1Q5TYW2 823 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 ANKRD20A3Q5VUR7 823 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 TMEM220Q6QAJ8 160 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 FAM151BQ6UXP7 276 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 CEACAM20Q6UY09 585 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 RANBP10Q6VN20 620 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 KIAA1328Q86T90 577 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 VASH2Q86V25 355 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 ZNF547Q8IVP9 402 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 CDKL3Q8IVW4 592 aaPredicted RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 RBM12BQ8IXT5 1001 aaKnown RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 TTC30BQ8N4P2 665 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 NKD1Q969G9 470 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 CXorf40BQ96DE9 158 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 PPP1R2P1Q96PQ5 205 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 BAG1Q99933 345 aaPredicted RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 C10orf88Q9H8K7 445 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 SLC40A1Q9NP59 571 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 SCHIP1Q9P0W5 487 aaPredicted RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 ZNF624Q9P2J8 865 aaPredicted RBP11.76□□□□□ -0.53
MED28-203ENST00000503945 TRIM10Q9UDY6 481 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 AMFRQ9UKV5 643 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 TMPRSS11EQ9UL52 423 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
MED28-203ENST00000503945 MAST4O15021 2626 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 GOLGA6L9A6NEM1 432 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 POLR1CO15160 346 aaPredicted RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 KCNN4O15554 427 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 SUV39H1O43463 412 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 BUD23O43709 281 aaKnown RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 ZNF189O75820 626 aaPredicted RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 FAM87AP0C7U9 286 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 SFTPCP11686 197 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 TYRP1P17643 537 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 MSH3P20585 1137 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 MAP4P27816 1152 aaKnown RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 DRG2P55039 364 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms