RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZADH2Q8N4Q0 377 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 SLC38A9Q8NBW4 561 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 CPT1BQ92523 772 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 LURAP1Q96LR2 239 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 MAP3K3Q99759 626 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 TUBB2BQ9BVA1 445 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 TRIM39Q9HCM9 518 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 ARFGAP3Q9NP61 516 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 NT5MQ9NPB1 228 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 SEPT11Q9NVA2 429 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 CWC15Q9P013 229 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 COPG2Q9UBF2 871 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 HIVEP1P15822 2718 aa15.5■□□□□ 0.07
PDLIM7-210ENST00000503827 C1orf232A0A0U1RR37 186 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 UBA6A0AVT1 1052 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 RGSL1A5PLK6 1076 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 IPO13O94829 963 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 SLC25A14O95258 325 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 BRAFP15056 766 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 IDSP22304 550 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PSMA2P25787 234 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PTGER4P35408 488 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 GPR19Q15760 415 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PLEKHS1Q5SXH7 462 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 TMTC4Q5T4D3 741 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 ZNF648Q5T619 568 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 FAM69BQ5VUD6 431 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 LCN10Q6JVE6 187 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 WASH2PQ6VEQ5 465 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 CERS6Q6ZMG9 384 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 LRRTM4Q86VH4 590 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 KCNMB4Q86W47 210 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PSTKQ8IV42 348 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 DSELQ8IZU8 1212 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 ATPAF2Q8N5M1 289 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 CCHCR1Q8TD31 782 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 INPP5DQ92835 1189 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 ZNF501Q96CX3 271 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 CLIP3Q96DZ5 547 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PEBP4Q96S96 227 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 CD180Q99467 661 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 TIMM29Q9BSF4 260 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 GANQ9H2C0 597 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 ZWILCHQ9H900 591 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 LATS2Q9NRM7 1088 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 CHKBQ9Y259 395 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PCDHGA10Q9Y5H3 936 aa15.49■□□□□ 0.07
PDLIM7-210ENST00000503827 PCSK5Q92824 1860 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 TLCD2A6NGC4 264 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 CHUKO15111 745 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 PRPSAP2O60256 369 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 RNF8O76064 485 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 CA4P22748 312 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 FECHP22830 423 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 DRG2P55039 364 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 POLR2FP61218 127 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 MYBPC3Q14896 1274 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 HSP90AA4PQ58FG1 418 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 ANKRD20A8PQ5CZ79 823 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 ZNF569Q5MCW4 686 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 DNTTIP2Q5QJE6 756 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 AGAP9Q5VTM2 703 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 TMCO3Q6UWJ1 677 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 Q6ZS92 163 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 ADGRG6Q86SQ4 1221 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 TTC30BQ8N4P2 665 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 CLEC1AQ8NC01 280 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 FER1L6-AS2Q96M78 137 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 IP6K3Q96PC2 410 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 LYSMD1Q96S90 227 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 POLR1EQ9GZS1 481 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 NLRC4Q9NPP4 1024 aa15.48■□□□□ 0.07
PDLIM7-210ENST00000503827 CSMD2Q7Z408 3487 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 A0A1B0GUH1 482 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 H3BRJ5 948 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 HALP42357 657 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 JAM2P57087 298 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 LLGL1Q15334 1064 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 CUZD1Q86UP6 607 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 MLKLQ8NB16 471 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 LPCAT1Q8NF37 534 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 SPATA16Q9BXB7 569 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 TDRD1Q9BXT4 1180 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 ZNF552Q9H707 407 aaPredicted RBP15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 CCDC88CQ9P219 2028 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 TRIM10Q9UDY6 481 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 SPTBP11277 2137 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 ZFHX3Q15911 3703 aa15.47■□□□□ 0.07
PDLIM7-210ENST00000503827 ZBTB11O95625 1053 aaPredicted RBP15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 IGHEP01854 428 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 EDN3P14138 238 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 VCLP18206 1134 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 AMPD1P23109 780 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 CES1P23141 567 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 IL4RP24394 825 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 OTX2P32243 289 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 CA5AP35218 305 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 ARL4AP40617 200 aa15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 RPL26P61254 145 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-210ENST00000503827 ART3Q13508 389 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms