RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TBC1D21Q8IYX1 336 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 KIRREL3Q8IZU9 778 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 OR6K2Q8NGY2 324 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 CEP70Q8NHQ1 597 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 ACTRT2Q8TDY3 377 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 SMG9Q9H0W8 520 aaKnown RBP11.47□□□□□ -0.57
USP46-204ENST00000503060 MEAF6Q9HAF1 191 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 PKP3Q9Y446 797 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 TRAF6Q9Y4K3 522 aa11.47□□□□□ -0.57
USP46-204ENST00000503060 LZTS3O60299 673 aaPredicted RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 OR1I1O60431 355 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 CCNT2O60583 730 aaKnown RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 KERAO60938 352 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 VPS26AO75436 327 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 TIPRLO75663 272 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 GLUD1P00367 558 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 ALPIP09923 528 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 MAPK8P45983 427 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 CLCN4P51793 760 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 INHBCP55103 352 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 ERVFC1P60507 584 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 ACTR3P61158 418 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 RPL26P61254 145 aaKnown RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 BCL2L1Q07817 233 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 HERC3Q15034 1050 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 CTSL3PQ5NE16 218 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 C1orf146Q5VVC0 180 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 PDE12Q6L8Q7 609 aaKnown RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 PGM2L1Q6PCE3 622 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 POMZP3Q6PJE2 187 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 C7orf61Q8IZ16 206 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 NKAPQ8N5F7 415 aaKnown RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 RP9Q8TA86 221 aaKnown RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 STAG3L4Q8TBR4 150 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 EID2BQ96D98 161 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 NRBF2Q96F24 287 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 MARK4Q96L34 752 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 TCF25Q9BQ70 676 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 EMILIN2Q9BXX0 1053 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 ABCB8Q9NUT2 735 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 GALPQ9UBC7 116 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 GIMAP2Q9UG22 337 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 IKZF3Q9UKT9 509 aa11.46□□□□□ -0.57
USP46-204ENST00000503060 COPG1Q9Y678 874 aaKnown RBP11.46□□□□□ -0.57
USP46-204ENST00000503060 TMEM221A6NGB7 291 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 TTC34A8MYJ7 566 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 HTRA2O43464 458 aaPredicted RBP11.46□□□□□ -0.58
USP46-204ENST00000503060 PLOD3O60568 738 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 NIPSNAP2O75323 286 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 GUCA1CO95843 209 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 FGBP02675 491 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 TSPAN8P19075 237 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 HMGCLP35914 325 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 CCR2P41597 374 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 C21orf58P58505 322 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 C1QTNF8P60827 252 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 CACNG1Q06432 222 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 LRP8Q14114 963 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 CCDC6Q16204 474 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 PFKFB4Q16877 469 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 WSCD2Q2TBF2 565 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 PPM1LQ5SGD2 360 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 TAS2R42Q7RTR8 314 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 KIAA0907Q7Z7F0 614 aaPredicted RBP11.46□□□□□ -0.58
USP46-204ENST00000503060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.46□□□□□ -0.58
USP46-204ENST00000503060 SHKBP1Q8TBC3 707 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 SLC30A3Q99726 388 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 ZBTB26Q9HCK0 441 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 STOML1Q9UBI4 398 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 TRMT6Q9UJA5 497 aaKnown RBP11.46□□□□□ -0.58
USP46-204ENST00000503060 INTS6Q9UL03 887 aaKnown RBP11.46□□□□□ -0.58
USP46-204ENST00000503060 INSL6Q9Y581 213 aa11.46□□□□□ -0.58
USP46-204ENST00000503060 SUPT3HB4E1H0 165 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 SOCS5O75159 536 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 SUPT3HO75486 399 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 SIX3O95343 332 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 IGSF6O95976 241 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 CYBBP04839 570 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 GFAPP14136 432 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 GKP32189 559 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 PTGER3P43115 390 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 PTDSS1P48651 473 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 CDH13P55290 713 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 CYLC2Q14093 348 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 NCCRP1Q6ZVX7 275 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 CHSY3Q70JA7 882 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 PELI3Q8N2H9 469 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 STK40Q8N2I9 435 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 LMLNQ96KR4 655 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 ASB2Q96Q27 587 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 POLMQ9NP87 494 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 STX18Q9P2W9 335 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 HECAQ9UBI9 543 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 CDH22Q9UJ99 828 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 RNF112Q9ULX5 631 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 IRAK3Q9Y616 596 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms