RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 MBTD1Q05BQ5 628 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 KIR2DS3Q14952 304 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 CCDC6Q16204 474 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 DUOXA1Q1HG43 343 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 NDUFAF5Q5TEU4 345 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 GKAP1Q5VSY0 366 aaPredicted RBP2.34□□□□□ -2.03
SMAD1-203ENST00000502342 TMEM198Q66K66 360 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 LCN10Q6JVE6 187 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 ARHGAP11AQ6P4F7 1023 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 NCEH1Q6PIU2 408 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 SARM1Q6SZW1 724 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 PLXDC2Q6UX71 529 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 PACS1Q6VY07 963 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 GLDNQ6ZMI3 551 aaPredicted RBP2.34□□□□□ -2.03
SMAD1-203ENST00000502342 CLEC17AQ6ZS10 378 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 ANO5Q75V66 913 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 ATG9AQ7Z3C6 839 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 HACE1Q8IYU2 909 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 GCSAMQ8N6F7 178 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 C1orf52Q8N6N3 182 aaKnown RBP2.34□□□□□ -2.03
SMAD1-203ENST00000502342 HJURPQ8NCD3 748 aaPredicted RBP2.34□□□□□ -2.03
SMAD1-203ENST00000502342 ZNF524Q96C55 264 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 CMTM3Q96MX0 182 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 GAD1Q99259 594 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 PSD2Q9BQI7 771 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 FSD1Q9BTV5 496 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 FTOQ9C0B1 505 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMAD1-203ENST00000502342 SEMA6AQ9H2E6 1030 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 RAD21L1Q9H4I0 556 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 ZBTB20Q9HC78 741 aaPredicted RBP2.34□□□□□ -2.03
SMAD1-203ENST00000502342 YIPF1Q9Y548 306 aa2.34□□□□□ -2.03
SMAD1-203ENST00000502342 A0A0G2JNG1 304 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 BLOC1S5-TXNDC5H3BN57 136 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM189-UBE2V1I3L0A0 370 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 J3QR06 171 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 NTN3O00634 580 aaPredicted RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SCAMP1O15126 338 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SMAD9O15198 467 aaKnown RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 OGG1O15527 345 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 EDIL3O43854 480 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 HS6ST1O60243 411 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 TMCC2O75069 709 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF217O75362 1048 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 WISP2O76076 250 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 PDE9AO76083 593 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 MBD4O95243 580 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 CD48P09326 243 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 RNF224P0DH78 156 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 ACTN1P12814 892 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 CDH2P19022 906 aaPredicted RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 GNAZP19086 355 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 HRH2P25021 359 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 EPHA2P29317 976 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 ALDH4A1P30038 563 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 DCTP40126 519 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 DRG2P55039 364 aaKnown RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 PPP2R2BQ00005 443 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SETQ01105 290 aaPredicted RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 IKQ13123 557 aaPredicted RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 UBE2V1Q13404 147 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 MAMLD1Q13495 774 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 KIR2DS5Q14953 304 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 MEP1AQ16819 746 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM30BQ3MIR4 351 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF876PQ49A33 203 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SOWAHCQ53LP3 525 aaPredicted RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 WDR38Q5JTN6 314 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 ZDHHC20Q5W0Z9 365 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 FAAH2Q6GMR7 532 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM154Q6P9G4 183 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 IKBIPQ70UQ0 350 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 Q75L30 129 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 PXKQ7Z7A4 578 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 PTOV1Q86YD1 416 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 WDSUB1Q8N9V3 476 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SLC38A9Q8NBW4 561 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 CTCFLQ8NI51 663 aaPredicted RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 FAM76AQ8TAV0 307 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 FCAMRQ8WWV6 532 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 HDAC2Q92769 488 aaKnown RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SEMA4DQ92854 862 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 KRT84Q9NSB2 600 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 ECHDC1Q9NTX5 307 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 PNMA2Q9UL42 364 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 KCNK7Q9Y2U2 307 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 C2CD2Q9Y426 696 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 SESN1Q9Y6P5 492 aa2.33□□□□□ -2.04
SMAD1-203ENST00000502342 TDRD9Q8NDG6 1382 aaKnown RBP2.33□□□□□ -2.04
SMAD1-203ENST00000502342 FRMD3A2A2Y4 597 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 B4E171 279 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 HHLA1C9JL84 531 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 LDLRP01130 860 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 CD4P01730 458 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 CLTBP09497 229 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 MAN1A1P33908 653 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TSPAN7P41732 249 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 CAMPP49913 170 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 GPR143P51810 404 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 PMP22Q01453 160 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms