RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RPL10P27635 214 aaKnown RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 LSSP48449 732 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 NPY2RP49146 381 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 VPS41P49754 854 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CDKN1CP49918 316 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 TERF1P54274 439 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 SESN2P58004 480 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 GABREP78334 506 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 SARNPP82979 210 aaKnown RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CACNG1Q06432 222 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 GPS1Q13098 491 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 SEPT7Q16181 437 aaKnown RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CYP1B1Q16678 543 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CLPPQ16740 277 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 MAP9Q49MG5 647 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 PCID2Q5JVF3 399 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 TSTD2Q5T7W7 516 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 FOXR1Q6PIV2 292 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 ABRAXAS1Q6UWZ7 409 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 SERPINA9Q86WD7 417 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 PROSER1Q86XN7 944 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 TRIM48Q8IWZ4 208 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 BEND7Q8N7W2 519 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 PPHLN1Q8NEY8 458 aaKnown RBP12.59□□□□□ -0.39
HSPG2-213ENST00000498495 FOXP3Q9BZS1 431 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 RDH14Q9HBH5 336 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 EPB41L5Q9HCM4 733 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 SMARCAL1Q9NZC9 954 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 BFARQ9NZS9 450 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CPNE7Q9UBL6 633 aa12.59□□□□□ -0.39
HSPG2-213ENST00000498495 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 MGAT4DA6NG13 374 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 TAF4O00268 1085 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 PHF2O75151 1096 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 TPSB2P20231 275 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 PSMA3P25788 255 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 ACRV1P26436 265 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 CD1CP29017 333 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 PBLDP30039 288 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 HALP42357 657 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 DRG2P55039 364 aaKnown RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 GPLD1P80108 840 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 CDK16Q00536 496 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 DMPKQ09013 629 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 TPSAB1Q15661 275 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 KCTD19Q17RG1 926 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 C3orf38Q5JPI3 329 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 AGAP9Q5VTM2 703 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 NKAIN2Q5VXU1 208 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 LRRC8BQ6P9F7 803 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 WASH2PQ6VEQ5 465 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 OR10G6Q8NH81 332 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 WDR36Q8NI36 951 aaKnown RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 GRK7Q8WTQ7 553 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 HDAC10Q969S8 669 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 TTC1Q99614 292 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 WASH6PQ9NQA3 447 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 SCHIP1Q9P0W5 487 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF624Q9P2J8 865 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-213ENST00000498495 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 SATB2Q9UPW6 733 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 TCAF1Q9Y4C2 921 aa12.58□□□□□ -0.4
HSPG2-213ENST00000498495 SPEGQ15772 3267 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 IGHV1OR21-1A0A087WYE8 117 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 TRBV5-4A0A0C4DH59 114 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 CCDC162PA2VCL2 907 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 KLHL33A6NCF5 533 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PRR19A6NJB7 356 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 BRINP1O60477 761 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PRSS56P0CW18 603 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 RBMS1P29558 406 aaKnown RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 CCKBRP32239 447 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 SLC19A1P41440 591 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 ARSDP51689 593 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PDX1P52945 283 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PRAMEP78395 509 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 ZFP36L1Q07352 338 aaKnown RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 EIF3IQ13347 325 aaKnown RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 SQSTM1Q13501 440 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 NFE2L1Q14494 772 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 CLCA4Q14CN2 919 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 BCL7AQ4VC05 210 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PHF19Q5T6S3 580 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PAPD7Q5XG87 772 aaKnown RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 METRNLQ641Q3 311 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 RAB11FIP2Q7L804 512 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 B3GNT8Q7Z7M8 397 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 CFAP206Q8IYR0 622 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 FBXO39Q8N4B4 442 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 OR13J1Q8NGT2 312 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 OR6P1Q8NGX9 317 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 OR2L2Q8NH16 312 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 OR4L1Q8NH43 312 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 NAT14Q8WUY8 206 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms