RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 H1FNTQ75WM6 255 aaPredicted RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 RSRC2Q7L4I2 434 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 APTXQ7Z2E3 356 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 DIS3L2Q8IYB7 885 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 ZCCHC9Q8N567 271 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 TC2NQ8N9U0 490 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 AGBL3Q8NEM8 1001 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 ST8SIA4Q92187 359 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 SMARCE1Q969G3 411 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 ZBTB10Q96DT7 871 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 SLITRK1Q96PX8 696 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 BBS4Q96RK4 519 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 FIZ1Q96SL8 496 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 BAG1Q99933 345 aaPredicted RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 TSPYL1Q9H0U9 437 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 RANBP17Q9H2T7 1088 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 PIH1D3Q9NQM4 214 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 C20orf141Q9NUB4 165 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 RMND1Q9NWS8 449 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 TRMT112Q9UI30 125 aaKnown RBP4.84□□□□□ -1.63
SSR3-209ENST00000498205 A4GNTQ9UNA3 340 aa4.84□□□□□ -1.63
SSR3-209ENST00000498205 COL5A3P25940 1745 aaPredicted RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 TNRC6CQ9HCJ0 1690 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 A0A0U1RQG5 324 aaPredicted RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 LINC01553A4QN01 128 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 USP27XA6NNY8 438 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 IFIT3O14879 490 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 TIMM23O14925 209 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 TACC1O75410 805 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 TFP02787 698 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 PYGLP06737 847 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 MMP2P08253 660 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 CCDC175P0C221 793 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ETFAP13804 333 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 MCM3P25205 808 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ABCD1P33897 745 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 LONP1P36776 959 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 PRPHP41219 470 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 GNAQP50148 359 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 GAS1P54826 345 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 EIF3BP55884 814 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 CLDN2P57739 230 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 CEBPZQ03701 1054 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 TROAPQ12815 778 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 PTP4A2Q12974 167 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 CALCRLQ16602 461 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 GSTA3Q16772 222 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 FILIP1LQ4L180 1135 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ALFQ53S48 1182 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 INTS11Q5TA45 600 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 TMCO3Q6UWJ1 677 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 LINGO2Q7L985 606 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 IQCA1Q86XH1 822 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 FOXP4Q8IVH2 680 aaPredicted RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 CEP112Q8N8E3 955 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 IQUBQ8NA54 791 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 MSANTD4Q8NCY6 345 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ARRDC2Q8TBH0 407 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 KLHL29Q96CT2 875 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 AK8Q96MA6 479 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 DOCK7Q96N67 2140 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ZNF570Q96NI8 536 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ZNF385AQ96PM9 386 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 OR1F2PQ96R84 312 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 LZTS2Q9BRK4 669 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 RIOK1Q9BRS2 568 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 UTP14AQ9BVJ6 771 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 BPIFA1Q9NP55 256 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 TCP11L1Q9NUJ3 509 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 HSPB7Q9UBY9 170 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ADD3Q9UEY8 706 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 LIMA1Q9UHB6 759 aaKnown RBP4.83□□□□□ -1.64
SSR3-209ENST00000498205 MAN1B1Q9UKM7 699 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 PPP2R2CQ9Y2T4 447 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 LAMB1P07942 1786 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 STRCQ7RTU9 1775 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 COL24A1Q17RW2 1714 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 ROBO1Q9Y6N7 1651 aa4.83□□□□□ -1.64
SSR3-209ENST00000498205 AKR1B15C9JRZ8 316 aaPredicted RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 PRSS44E7EML9 344 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 MAP2K7O14733 419 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 HSPA12AO43301 675 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 KLK8O60259 260 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 ERLIN1O75477 346 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 TIPRLO75663 272 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 IDH1O75874 414 aaKnown RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 MBD4O95243 580 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 F9P00740 461 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 PNMA6AP0CW24 399 aaPredicted RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 ATP1A3P13637 1013 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 AGAP20933 346 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 HMGB2P26583 209 aaKnown RBP4.82□□□□□ -1.64
SSR3-209ENST00000498205 KIF5BP33176 963 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 KRT2P35908 639 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 CPOXP36551 454 aa4.82□□□□□ -1.64
SSR3-209ENST00000498205 HAND2P61296 217 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms