RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 FAM157CP0CG43 387 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 TYMPP19971 482 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 CTCFP49711 727 aaPredicted RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 SNAI3Q3KNW1 292 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 RAB6CQ53S08 254 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 TCTEX1D4Q5JR98 221 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 GORABQ5T7V8 394 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 ACAD10Q6JQN1 1059 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 SCML4Q8N228 414 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 OR2T6Q8NHC8 308 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 OXNAD1Q96HP4 312 aaPredicted RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 GMPPAQ96IJ6 420 aaPredicted RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 STRA6Q9BX79 667 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 PAIP1Q9H074 479 aaKnown RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 RAB6CQ9H0N0 254 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 SLC25A18Q9H1K4 315 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 KLHL8Q9P2G9 620 aaPredicted RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 DNAJB4Q9UDY4 337 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 ARHGAP26Q9UNA1 814 aa3.4□□□□□ -1.87
SMC4-227ENST00000497984 EXOGQ9Y2C4 368 aaKnown RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 TDRD15B5MCY1 1934 aaKnown RBP3.4□□□□□ -1.87
SMC4-227ENST00000497984 PRAG1Q86YV5 1406 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 A6NLC8 198 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 ANKRD66B4E2M5 251 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 TFAP2AP05549 437 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 LIFP15018 202 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 GNAZP19086 355 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 UBA1P22314 1058 aaKnown RBP3.39□□□□□ -1.87
SMC4-227ENST00000497984 NR2F2P24468 414 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 ITGA3P26006 1051 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 SLC8A3P57103 927 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 RPL7AP62424 266 aaKnown RBP3.39□□□□□ -1.87
SMC4-227ENST00000497984 PPARDQ03181 441 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 CCNG2Q16589 344 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 CDC73Q6P1J9 531 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 PACS1Q6VY07 963 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 GSTA5Q7RTV2 222 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 EXOC8Q8IYI6 725 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 RDM1Q8NG50 284 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 GRHL3Q8TE85 626 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 FAM149B1Q96BN6 582 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 MAP7D2Q96T17 732 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 SLX1AQ9BQ83 275 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 TRIM51Q9BSJ1 452 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 APOBEC3GQ9HC16 384 aaKnown RBP3.39□□□□□ -1.87
SMC4-227ENST00000497984 ABI3Q9P2A4 366 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 INTS6Q9UL03 887 aaKnown RBP3.39□□□□□ -1.87
SMC4-227ENST00000497984 CROCCQ5TZA2 2017 aa3.39□□□□□ -1.87
SMC4-227ENST00000497984 PLEKHD1A6NEE1 506 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 SNAP23O00161 211 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 BUD23O43709 281 aaKnown RBP3.38□□□□□ -1.87
SMC4-227ENST00000497984 PIP4K2AP48426 406 aaPredicted RBP3.38□□□□□ -1.87
SMC4-227ENST00000497984 TUBP50607 506 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 INTS11Q5TA45 600 aaKnown RBP3.38□□□□□ -1.87
SMC4-227ENST00000497984 HEATR4Q86WZ0 1026 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 PSPC1Q8WXF1 523 aaKnown RBP3.38□□□□□ -1.87
SMC4-227ENST00000497984 GTF3C6Q969F1 213 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 ZNF414Q96IQ9 312 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 PRMT6Q96LA8 375 aaPredicted RBP3.38□□□□□ -1.87
SMC4-227ENST00000497984 HARBI1Q96MB7 349 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 TMEM68Q96MH6 324 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 MYH16Q9H6N6 1097 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 PREBQ9HCU5 417 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 UBA2Q9UBT2 640 aaPredicted RBP3.38□□□□□ -1.87
SMC4-227ENST00000497984 NAALADL1Q9UQQ1 740 aa3.38□□□□□ -1.87
SMC4-227ENST00000497984 EIF3CLB5ME19 914 aaKnown RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 PLOD2O00469 737 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 TMEM63AO94886 807 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 EML2O95834 649 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZNF182P17025 639 aaPredicted RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 BSGP35613 385 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 WNT5AP41221 380 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 RARSP54136 660 aaKnown RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 OLR1P78380 273 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZBED6P86452 979 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 TBX2Q13207 712 aaPredicted RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 ENPP2Q13822 863 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 UGP2Q16851 508 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 SOWAHCQ53LP3 525 aaPredicted RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 CXorf66Q5JRM2 361 aaPredicted RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 PWWP2BQ6NUJ5 590 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 GBGT1Q8N5D6 347 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZNF614Q8N883 585 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 NAXEQ8NCW5 288 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 OR14L1PQ8NHC6 308 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 UTP15Q8TED0 518 aaKnown RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZNRF4Q8WWF5 429 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZUFSPQ96AP4 578 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 RRP36Q96EU6 259 aaKnown RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 RRNAD1Q96FB5 475 aaKnown RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 PRAC1Q96KF2 57 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 PPM1MQ96MI6 270 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZNF300Q96RE9 604 aaPredicted RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 KIF9Q9HAQ2 790 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 SLC28A3Q9HAS3 691 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 PLCXD1Q9NUJ7 323 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 PRR34Q9NV39 138 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 SLC38A7Q9NVC3 462 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 FAM120CQ9NX05 1096 aaKnown RBP3.37□□□□□ -1.87
SMC4-227ENST00000497984 OR14J1Q9UGF5 321 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms