RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 AGAP5A6NIR3 686 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 MYO1GB0I1T2 1018 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 UBXN8O00124 270 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 RGS5O15539 181 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 MED26O95402 600 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 UMPSP11172 480 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CHRNA4P43681 627 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NPY2RP49146 381 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CYP4F2P78329 520 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CYP4F3Q08477 520 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 BCL7AQ4VC05 210 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 PARP16Q8N5Y8 322 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 IGSF5Q9NSI5 407 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NSMCE4AQ9NXX6 385 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 MAT2BQ9NZL9 334 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 EHD3Q9NZN3 535 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CRNNQ9UBG3 495 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CRYL1Q9Y2S2 319 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 AZIN1O14977 448 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 TSC22D2O75157 780 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CYBBP04839 570 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 RBP1P09455 135 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 HSMCR30P0CW71 290 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CYP2B6P20813 491 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 MASP1P48740 699 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 CLCN3P51790 818 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 PPP2R2BQ00005 443 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NRG1Q02297 640 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 GHRHRQ02643 423 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF181Q2M3W8 571 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 NAPEPLDQ6IQ20 393 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 ERAP2Q6P179 960 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 BEND5Q7L4P6 421 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 TRIM63Q969Q1 353 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 FAM162AQ96A26 154 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 THUMPD3Q9BV44 507 aaKnown RBP12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 TRIM54Q9BYV2 358 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 POLG2Q9UHN1 485 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 C3orf18Q9UK00 162 aa12.95□□□□□ -0.34
GAPVD1-220ENST00000497580 SAGE2PA6NJ88 616 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 ERI2A8K979 691 aaKnown RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 TSPAN9O75954 239 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 PTTG1O95997 202 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 GRK3P35626 688 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 SERPINH1P50454 418 aaKnown RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 EFNA5P52803 228 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 CDK5R2Q13319 367 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 SYPL2Q5VXT5 272 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 BHMTQ93088 406 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 AURKBQ96GD4 344 aaPredicted RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF300Q96RE9 604 aaPredicted RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 NRBP2Q9NSY0 501 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 GREB1LQ9C091 1923 aaPredicted RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 DFFAO00273 331 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 UPK1AO00322 258 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 B4GALT4O60513 344 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 NDST3O95803 873 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 ANXA6P08133 673 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 RAP2AP10114 183 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 SNRPD2P62316 118 aaKnown RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 GRAMD2AQ8IUY3 354 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 CCDC126Q96EE4 140 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 KCNS3Q9BQ31 491 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 ROGDIQ9GZN7 287 aa12.94□□□□□ -0.34
GAPVD1-220ENST00000497580 A0A087X1B8 175 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 PCP4L1A6NKN8 68 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 PRKD3O94806 890 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 TP53BP2Q13625 1128 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 FSCN1Q16658 493 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ATP6AP1LQ52LC2 224 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 SPANXN2Q5MJ10 180 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 IRAK1BP1Q5VVH5 260 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 EFL1Q7Z2Z2 1120 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 NRARPQ7Z6K4 114 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 TCAIMQ8N3R3 496 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 PPHLN1Q8NEY8 458 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 IL17RDQ8NFM7 739 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ESAMQ96AP7 390 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 PYCR2Q96C36 320 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 CARS2Q9HA77 564 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 FZD10Q9ULW2 581 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 WNT10BO00744 389 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 STAT5BP51692 787 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 DNAJB13P59910 316 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ISL1P61371 349 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ARMC4Q5T2S8 1044 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 DENND5AQ6IQ26 1287 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 BPIFB1Q8TDL5 484 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms