RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CDCP2Q5VXM1 449 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 LRRC8BQ6P9F7 803 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 WASH2PQ6VEQ5 465 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 SYDE1Q6ZW31 735 aaPredicted RBP11.29□□□□□ -0.6
HLA-B-254ENST00000497377 ZNF438Q7Z4V0 828 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 ZNF547Q8IVP9 402 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 NAGSQ8N159 534 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 SFRP1Q8N474 314 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 ARL14Q8N4G2 192 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 DCBLD1Q8N8Z6 715 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 RASGEF1AQ8N9B8 481 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.29□□□□□ -0.6
HLA-B-254ENST00000497377 CCDC74AQ96AQ1 378 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 SGSM3Q96HU1 749 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 DEPDC7Q96QD5 511 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 TTC1Q99614 292 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 COPS8Q99627 209 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 STN1Q9H668 368 aaKnown RBP11.29□□□□□ -0.6
HLA-B-254ENST00000497377 WASH6PQ9NQA3 447 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 KLC4Q9NSK0 619 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 KCNK6Q9Y257 313 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 PCYT1BQ9Y5K3 369 aaPredicted RBP11.29□□□□□ -0.6
HLA-B-254ENST00000497377 CEP295Q9C0D2 2601 aa11.29□□□□□ -0.6
HLA-B-254ENST00000497377 IGLV3-16A0A075B6K0 115 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 A6NCN8 305 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 TMEM8BA6NDV4 472 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 PRR19A6NJB7 356 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 RHPN2P1A8MT19 583 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 F8W8V4 182 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 GPR39O43194 453 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 MT-CO3P00414 261 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 GSTM1P09488 218 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 MLNP12872 115 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 F3P13726 295 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 ACRV1P26436 265 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 CASQ1P31415 396 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 PPARGP37231 505 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 VPS41P49754 854 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 MAZP56270 477 aaKnown RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 PRAMEP78395 509 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 GSTM4Q03013 218 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 SPIDRQ14159 915 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 CLPPQ16740 277 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 BCL7AQ4VC05 210 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 CCDC38Q502W7 563 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 AGAP9Q5VTM2 703 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 IYDQ6PHW0 289 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 TMEM220Q6QAJ8 160 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 ABRAXAS1Q6UWZ7 409 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 CERS6Q6ZMG9 384 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 RBM44Q6ZP01 1051 aaKnown RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 C11orf96Q7Z7L8 435 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 SLC9B2Q86UD5 537 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 AMZ2Q86W34 360 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 MCUQ8NE86 351 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 OR13J1Q8NGT2 312 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 GATA6Q92908 595 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 SH3KBP1Q96B97 665 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 CAPZA3Q96KX2 299 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 OSGEPL1Q9H4B0 414 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 VPS37BQ9H9H4 285 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 MRM3Q9HC36 420 aaKnown RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 XAB2Q9HCS7 855 aaKnown RBP11.28□□□□□ -0.6
HLA-B-254ENST00000497377 ZDHHC3Q9NYG2 299 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 TBC1D29Q9UFV1 150 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 RNF215Q9Y6U7 377 aa11.28□□□□□ -0.6
HLA-B-254ENST00000497377 TMX2-CTNND1H3BSU7 103 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 QSOX1O00391 747 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 POP7O75817 140 aaKnown RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 ATP1B2P14415 290 aaPredicted RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 IDSP22304 550 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 CA5AP35218 305 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 PRLHRP49683 370 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 ARSDP51689 593 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 TARDBPQ13148 414 aaKnown RBP eCLIP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 PTK6Q13882 451 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 ITIH4Q14624 930 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 AARS2Q5JTZ9 985 aaKnown RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 FNBP1LQ5T0N5 605 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 UNQ6494/PRO21346Q6UXR6 183 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 TAS2R42Q7RTR8 314 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SPRED1Q7Z699 444 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 PCGF5Q86SE9 256 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SERPINA9Q86WD7 417 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 PPIL6Q8IXY8 311 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SLC37A2Q8TED4 501 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 CPT1BQ92523 772 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 HDAC10Q969S8 669 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 GFM1Q96RP9 751 aaKnown RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SPSB2Q99619 263 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 DPYSL5Q9BPU6 564 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 KIFC1Q9BW19 673 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 DDX47Q9H0S4 455 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms