RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CTSCP53634 463 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 GTF2H2Q13888 395 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 ZNF324BQ6AW86 544 aaPredicted RBP4.65□□□□□ -1.67
VPS36-206ENST00000497149 GTF2H2CQ6P1K8 395 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 ASB18Q6ZVZ8 466 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 Q75L30 129 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 INTS8Q75QN2 995 aaKnown RBP4.65□□□□□ -1.67
VPS36-206ENST00000497149 SFR1Q86XK3 245 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS36-206ENST00000497149 MINDY1Q8N5J2 469 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 TMCO6Q96DC7 493 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 DUX5Q96PT3 197 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 SERINC2Q96SA4 455 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 ABHD1Q96SE0 405 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 CDRT15Q96T59 188 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 SYT17Q9BSW7 474 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 HGH1Q9BTY7 390 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 C1QTNF4Q9BXJ3 329 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 SPATC1LQ9H0A9 340 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 CSTL1Q9H114 145 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 LRMDAQ9H2I8 198 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 KCNK15Q9H427 330 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 TCP11L1Q9NUJ3 509 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 LARSQ9P2J5 1176 aaKnown RBP4.65□□□□□ -1.67
VPS36-206ENST00000497149 AMACRQ9UHK6 382 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 NRBP1Q9UHY1 535 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 HACL1Q9UJ83 578 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 OR2W1Q9Y3N9 320 aa4.65□□□□□ -1.67
VPS36-206ENST00000497149 IGHV4OR15-8A0A075B7B6 117 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 CLGNO14967 610 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 TIMM44O43615 452 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 PLOD3O60568 738 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 CENPBP07199 599 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 POLR2CP19387 275 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 KRT20P35900 424 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 ARSEP51690 589 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 CD81P60033 236 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 EEF1A1P68104 462 aaKnown RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 RUNX1T1Q06455 604 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 KRT33BQ14525 404 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 FAM98BQ52LJ0 330 aaKnown RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 RAB6CQ53S08 254 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 EEF1A1P5Q5VTE0 462 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 NAA16Q6N069 864 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 TMCO3Q6UWJ1 677 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS36-206ENST00000497149 ZNF704Q6ZNC4 412 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 LDB1Q86U70 411 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 KMT5CQ86Y97 462 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 GALNT13Q8IUC8 556 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 AVL9Q8NBF6 648 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 KCNH5Q8NCM2 988 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 MCUQ8NE86 351 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 BBS10Q8TAM1 723 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 LNX1Q8TBB1 728 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 ZNF622Q969S3 477 aaKnown RBP eCLIP4.64□□□□□ -1.679e-6■■□□□ 12.8
VPS36-206ENST00000497149 ERP27Q96DN0 273 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 IGSF21Q96ID5 467 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 TTC14Q96N46 770 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 SLC22A12Q96S37 553 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 APOL6Q9BWW8 343 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 MRPL1Q9BYD6 325 aaKnown RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 KLHL4Q9C0H6 718 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 RAB6CQ9H0N0 254 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 MMP27Q9H306 513 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 DENND2DQ9H6A0 471 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 EBF2Q9HAK2 575 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 TAS2R14Q9NYV8 317 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 MARCH4Q9P2E8 410 aaPredicted RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 CPSF2Q9P2I0 782 aaKnown RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 KLHL9Q9P2J3 617 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 RALYQ9UKM9 306 aaKnown RBP4.64□□□□□ -1.67
VPS36-206ENST00000497149 FAM169AQ9Y6X4 670 aa4.64□□□□□ -1.67
VPS36-206ENST00000497149 GPR75-ASB3A0A0A6YYF3 556 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 ZCWPW2A0A1B0GU75 182 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 PLSCR5A0PG75 271 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 SYNDIG1LA6NDD5 238 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 OR5K3A6NET4 321 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 A6NL46 340 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 TULP2O00295 520 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 ACOT8O14734 319 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 ZNHIT1O43257 154 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 CSPG5O95196 566 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 ZWINTO95229 277 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 FAM106CPP0CH98 169 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 FGF3P11487 239 aaPredicted RBP4.63□□□□□ -1.67
VPS36-206ENST00000497149 CDH1P12830 882 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 NR2F2P24468 414 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 AMPHP49418 695 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 SIRPAP78324 504 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 EEF1A2Q05639 463 aaKnown RBP4.63□□□□□ -1.67
VPS36-206ENST00000497149 CALD1Q05682 793 aaKnown RBP4.63□□□□□ -1.67
VPS36-206ENST00000497149 GAGE2BQ13066 116 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 IZUMO4Q1ZYL8 232 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 GAGE2EQ4V326 116 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 DHRS7BQ6IAN0 325 aaPredicted RBP4.63□□□□□ -1.67
VPS36-206ENST00000497149 GAGE2AQ6NT46 116 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 UNQ6126/PRO20091Q6UXV3 157 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 RAD9BQ6WBX8 426 aa4.63□□□□□ -1.67
VPS36-206ENST00000497149 MEPCEQ7L2J0 689 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms