RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GJA1P17302 382 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 SLC7A2P52569 658 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 SNRPD1P62314 119 aaKnown RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 MED21Q13503 144 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PCBP2Q15366 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PITRM1Q5JRX3 1037 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 DGKKQ5KSL6 1271 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 GRAMD4Q6IC98 578 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 LILRA6Q6PI73 481 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 MYO1HQ8N1T3 1032 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PDPRQ8NCN5 879 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 LKAAEAR1Q8TD35 194 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CCT7Q99832 543 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 GPATCH1Q9BRR8 931 aaKnown RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 SLC39A3Q9BRY0 314 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 PCDHAC1Q9H158 963 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 IL26Q9NPH9 171 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 ASAH2Q9NR71 780 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 CRLS1Q9UJA2 301 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 TNPO3Q9Y5L0 923 aaKnown RBP12.89□□□□□ -0.35
GARNL3-220ENST00000496711 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
GARNL3-220ENST00000496711 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-220ENST00000496711 RAD51BO15315 384 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 STAMBPO95630 424 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 LINGO3P0C6S8 592 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 ACRP10323 421 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 SRCP12931 536 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 CA5AP35218 305 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 DIO3P55073 304 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 GRIK2Q13002 908 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 GPR33Q49SQ1 333 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 VPS26BQ4G0F5 336 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 C6orf10Q5SRN2 563 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 ZSWIM9Q86XI8 627 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 LILRA2Q8N149 483 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 CBARPQ8N350 705 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-220ENST00000496711 KREMEN2Q8NCW0 462 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 ADCY4Q8NFM4 1077 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 TSPEARQ8WU66 669 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 TUBGCP5Q96RT8 1024 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 LYSMD1Q96S90 227 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 PKP2Q99959 881 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
GARNL3-220ENST00000496711 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 HTATIP2Q9BUP3 242 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 SPATS2LQ9NUQ6 558 aaKnown RBP12.88□□□□□ -0.35
GARNL3-220ENST00000496711 ABCD2Q9UBJ2 740 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 PRSS21Q9Y6M0 314 aa12.88□□□□□ -0.35
GARNL3-220ENST00000496711 TRIM43BA6NCK2 446 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 NPIPB15A6NHN6 443 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 FFAR2O15552 330 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 RNASEH1O60930 286 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ITGB6P18564 788 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 DGKAP23743 735 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 STK19P49842 368 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ERVK-8P63133 956 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 RHDQ02161 417 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 FOXM1Q08050 763 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CHRNA6Q15825 494 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 OR52E8Q6IFG1 317 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 BLOC1S3Q6QNY0 202 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 GOLGA7Q7Z5G4 137 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CMTM8Q8IZV2 173 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 MINDY1Q8N5J2 469 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ZBTB2Q8N680 514 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CDYL2Q8N8U2 506 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 OR52B6Q8NGF0 335 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 OR2T11Q8NH01 316 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ATP6V1E2Q96A05 226 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 LMLNQ96KR4 655 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 RPL10LQ96L21 214 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 SLC46A2Q9BY10 475 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 FAM126AQ9BYI3 521 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 BRINP2Q9C0B6 783 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 SMG9Q9H0W8 520 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 NOL11Q9H8H0 719 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 GID8Q9NWU2 228 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 MAP10Q9P2G4 905 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 PDP2Q9P2J9 529 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 HS3ST2Q9Y278 367 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 OARD1Q9Y530 152 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 C9JVG2 144 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 FXYD1O00168 92 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 SLC25A14O95258 325 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CXCL14O95715 111 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 GLUD1P00367 558 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 LINC00271P0C7V0 271 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 HSPA8P11142 646 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 VCLP18206 1134 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ARL1P40616 181 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 PTPN5P54829 565 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms