RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 XRCC1P18887 633 aaPredicted RBP14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A6P19224 532 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A1P22309 533 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A4P22310 534 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 RPL10P27635 214 aaKnown RBP14.04□□□□□ -0.16
VTI1A-209ENST00000496445 PSMB4P28070 264 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A3P35503 534 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 CTSCP53634 463 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 DRG2P55039 364 aaKnown RBP14.04□□□□□ -0.16
VTI1A-209ENST00000496445 TMEM115Q12893 351 aaPredicted RBP14.04□□□□□ -0.16
VTI1A-209ENST00000496445 LINC00303Q3SY05 128 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 TMEM26Q6ZUK4 368 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 GAS2L3Q86XJ1 694 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 TRAPPC5Q8IUR0 188 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 TMEM139Q8IV31 216 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 AVL9Q8NBF6 648 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 DDHD1Q8NEL9 900 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 NKD1Q969G9 470 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 RTP4Q96DX8 246 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 CTRCQ99895 268 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 FSD1LQ9BXM9 530 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 OSBPL8Q9BZF1 889 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 EPB41L1Q9H4G0 881 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A7Q9HAW7 530 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A10Q9HAW8 530 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 UGT1A8Q9HAW9 530 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 APMAPQ9HDC9 416 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 EFR3BQ9Y2G0 817 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 WDR37Q9Y2I8 494 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 PCDHB11Q9Y5F2 797 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 ARL5AQ9Y689 179 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 SLC30A1Q9Y6M5 507 aa14.04□□□□□ -0.16
VTI1A-209ENST00000496445 A0A0U1RQJ8 604 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 CCDC66A2RUB6 948 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 C9P02748 559 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 PYGMP11217 842 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 ADRA1AP35348 466 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
VTI1A-209ENST00000496445 VAV2P52735 878 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 GEMP55040 296 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 RAB15P59190 212 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 MC2RQ01718 297 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 GTF2H3Q13889 308 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 CLCA4Q14CN2 919 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 GPRC6AQ5T6X5 926 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 AGAP9Q5VTM2 703 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 ZDHHC20Q5W0Z9 365 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 ITPRIPL1Q6GPH6 555 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 ABRAXAS1Q6UWZ7 409 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 WASH2PQ6VEQ5 465 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
VTI1A-209ENST00000496445 RASGEF1AQ8N9B8 481 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 EXD3Q8N9H8 876 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 GDAP1Q8TB36 358 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 CALR3Q96L12 384 aaKnown RBP14.03□□□□□ -0.16
VTI1A-209ENST00000496445 APOL2Q9BQE5 337 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 SPRY4Q9C004 299 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 WASH6PQ9NQA3 447 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 POT1Q9NUX5 634 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 SIDT1Q9NXL6 827 aaKnown RBP14.03□□□□□ -0.16
VTI1A-209ENST00000496445 TRIM10Q9UDY6 481 aa14.03□□□□□ -0.16
VTI1A-209ENST00000496445 KCNN4O15554 427 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 UBXN7O94888 489 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 VIPP01282 170 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 ANKRD34CP0C6C1 535 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 RBP3P10745 1247 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 TYRP1P17643 537 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 IDSP22304 550 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 CAPZBP47756 277 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 ATP1A2P50993 1020 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 NAP1L1P55209 391 aaKnown RBP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 RWDD2BP57060 319 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 EIF3EP60228 445 aaKnown RBP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 CYP4F2P78329 520 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 DMPKQ09013 629 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 MSLNQ13421 630 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 GPR18Q14330 331 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 ANKRD20A2Q5SQ80 823 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 DCAF12Q5T6F0 453 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 ANKRD20A1Q5TYW2 823 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 ANKRD20A3Q5VUR7 823 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 XKR5Q6UX68 686 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 RANBP10Q6VN20 620 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 FAM83HQ6ZRV2 1179 aaPredicted RBP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 TRIM48Q8IWZ4 208 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 GPR150Q8NGU9 434 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 NAT14Q8WUY8 206 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 RSC1A1Q92681 617 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 EXTL1Q92935 676 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 MED8Q96G25 268 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 TEFMQ96QE5 360 aaKnown RBP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 ASPSCR1Q9BZE9 553 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 SLC40A1Q9NP59 571 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 SMOXQ9NWM0 555 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.02□□□□□ -0.17
VTI1A-209ENST00000496445 PILRAQ9UKJ1 303 aa14.02□□□□□ -0.17
VTI1A-209ENST00000496445 PKP3Q9Y446 797 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms