RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 IPO7O95373 1038 aaKnown RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 RBP3P10745 1247 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 BRAFP15056 766 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 XRCC1P18887 633 aaPredicted RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 CD82P27701 267 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 CTNNA1P35221 906 aaKnown RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 SPAM1P38567 509 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 SEPHS1P49903 392 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 GEMP55040 296 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 GFERP55789 205 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 RWDD2BP57060 319 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 EIF3EP60228 445 aaKnown RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 UBE2IP63279 158 aaKnown RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 TMPRSS15P98073 1019 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 XRCC4Q13426 336 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 SPARCL1Q14515 664 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 CLCA4Q14CN2 919 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 LINC00303Q3SY05 128 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ANKRD20A2Q5SQ80 823 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 DCAF12Q5T6F0 453 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ANKRD20A1Q5TYW2 823 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ANKRD20A3Q5VUR7 823 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 WDR74Q6RFH5 385 aaPredicted RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 TMEM26Q6ZUK4 368 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ARHGAP22Q7Z5H3 698 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 C11orf96Q7Z7L8 435 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 TRAPPC5Q8IUR0 188 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 BEND7Q8N7W2 519 aaPredicted RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 EXD3Q8N9H8 876 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ZSCAN1Q8NBB4 408 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 CCDC112Q8NEF3 446 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 OR4K2Q8NGD2 314 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ZNF398Q8TD17 642 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 BRSK1Q8TDC3 778 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 WBP1Q96G27 269 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 TGM7Q96PF1 710 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 VPS35Q96QK1 796 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 GORASP1Q9BQQ3 440 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ARHGAP9Q9BRR9 750 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 FSD1LQ9BXM9 530 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 TRABDQ9H4I3 376 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 NFKBIL1Q9UBC1 381 aaPredicted RBP9.44□□□□□ -0.9
MSH5-218ENST00000494646 PSMD13Q9UNM6 376 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 WDR37Q9Y2I8 494 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 KCTD3Q9Y597 815 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 PCDHGA3Q9Y5H0 932 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ARL5AQ9Y689 179 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 COL6A6A6NMZ7 2263 aa9.44□□□□□ -0.9
MSH5-218ENST00000494646 ZNF462Q96JM2 2506 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 PIKFYVEQ9Y2I7 2098 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 OR2AG2A6NM03 316 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 B4E171 279 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 GPR89AB7ZAQ6 455 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
MSH5-218ENST00000494646 UBXN7O94888 489 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 GPR89BP0CG08 455 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 HLA-DPA1P20036 260 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 PSMB4P28070 264 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 PBLDP30039 288 aaPredicted RBP9.43□□□□□ -0.9
MSH5-218ENST00000494646 TSPAN7P41732 249 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 CTSCP53634 463 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 COPS2P61201 443 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 MC2RQ01718 297 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 FOXM1Q08050 763 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 GPRC6AQ5T6X5 926 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 ABRAXAS1Q6UWZ7 409 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 MICALCLQ6ZW33 695 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 DET1Q7L5Y6 550 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 KIAA1328Q86T90 577 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 AMZ2Q86W34 360 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 CACNA2D3Q8IZS8 1091 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 BMPERQ8N8U9 685 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 RASGEF1AQ8N9B8 481 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 SPC24Q8NBT2 197 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 CCDC110Q8TBZ0 833 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 ALG3Q92685 438 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 CXorf40BQ96DE9 158 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 RTP4Q96DX8 246 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 TIMM29Q9BSF4 260 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 ASPSCR1Q9BZE9 553 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 B3GNT4Q9C0J1 378 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 FAM96AQ9H5X1 160 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 ASB8Q9H765 288 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 HACD3Q9P035 362 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 FAM8A1Q9UBU6 413 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 AMFRQ9UKV5 643 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
MSH5-218ENST00000494646 PKP3Q9Y446 797 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 TENM4Q6N022 2769 aa9.43□□□□□ -0.9
MSH5-218ENST00000494646 CCDC66A2RUB6 948 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 GRID2IPA4D2P6 1211 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 C2orf81A6NN90 581 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 GAPDHSO14556 408 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 POLR1CO15160 346 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 PJA2O43164 708 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms