RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 HEATR4Q86WZ0 1026 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 FAM129CQ86XR2 697 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 CLEC18CQ8NCF0 446 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 GPBAR1Q8TDU6 330 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 GBA3Q9H227 469 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 WDR26Q9H7D7 661 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 APMAPQ9HDC9 416 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 EIF2B3Q9NR50 452 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 SLC39A1Q9NY26 324 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 B4GALT6Q9UBX8 382 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 SEPT3Q9UH03 358 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 RSPH14Q9UHP6 348 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 RAB21Q9UL25 225 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 SUFUQ9UMX1 484 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 NEU2Q9Y3R4 380 aa11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 PCYT1BQ9Y5K3 369 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 MRPS18BQ9Y676 258 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 V9GYY5 206 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-212ENST00000494610 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 AP3B1O00203 1094 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 DNALI1O14645 258 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ANXA9O76027 345 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 SEC31AO94979 1220 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 PTPN3P26045 913 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ETV3P41162 512 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 CASRP41180 1078 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 MMP13P45452 471 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 CCR10P46092 362 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 LIMK2P53671 638 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 GDF10P55107 478 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 BASP1P80723 227 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 CTBSQ01459 385 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 SLC14A2Q15849 920 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 PARP6Q2NL67 630 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 DEFB109BQ30KR1 87 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 RALGPS1Q5JS13 557 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ANKRD20A2Q5SQ80 823 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ANKRD20A1Q5TYW2 823 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ANKRD20A3Q5VUR7 823 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 IZUMO3Q5VZ72 239 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 BRAT1Q6PJG6 821 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 DPPA4Q7L190 304 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 HSD11B1LQ7Z5J1 315 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 TRIM74Q86UV6 250 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 PPIL6Q8IXY8 311 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 NRSN1Q8IZ57 195 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ABHD17AQ96GS6 310 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 COQ10AQ96MF6 247 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ZNF641Q96N77 438 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 PSMG3-AS1Q96PY0 264 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 CINPQ9BW66 212 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 TRIM31Q9BZY9 425 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 ADNPQ9H2P0 1102 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 DPH5Q9H2P9 285 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 TMEM98Q9Y2Y6 226 aa11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-212ENST00000494610 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 RP1L1Q8IWN7 2480 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 IGHV1OR21-1A0A087WYE8 117 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 BHMG1C9JSJ3 638 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 KCNK1O00180 336 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 TRAFD1O14545 582 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 TNFRSF10CO14798 259 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 THRAP10827 490 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 TPSB2P20231 275 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 CA4P22748 312 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 CD82P27701 267 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 RPL22P35268 128 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 RPL21P46778 160 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 LMAN1P49257 510 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 VPS41P49754 854 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 SCNN1BP51168 640 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 SUOXP51687 545 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 GEMP55040 296 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 MLLT10P55197 1068 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 LBRQ14739 615 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 NR1D2Q14995 579 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 TPSAB1Q15661 275 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 CNGA3Q16281 694 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 C4orf17Q53FE4 359 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 C16orf46Q6P387 395 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 EMBQ6PCB8 327 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 MARK2Q7KZI7 788 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 PID1Q7Z2X4 250 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 ZNF567Q8N184 647 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 PAF1Q8N7H5 531 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 BMPERQ8N8U9 685 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 C9orf43Q8TAL5 461 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 CCDC110Q8TBZ0 833 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 HCAR2Q8TDS4 363 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 NUS1Q96E22 293 aa11.63□□□□□ -0.55
CSNK1E-212ENST00000494610 TEKT5Q96M29 485 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms