RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SPECC1L-ADORA2AF8WAN1 911 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 GFYI3L273 518 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 QSOX1O00391 747 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 WNT9AO14904 365 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 KPNA5O15131 536 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 HDAC3O15379 428 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 MBTPS2O43462 519 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TSPAN6O43657 245 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 MAGEC1O60732 1142 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LILRB5O75023 590 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ADAM23O75077 832 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SLCO2B1O94956 709 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 FSBPO95073 299 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SLC25A14O95258 325 aaPredicted RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 ADH1BP00325 375 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CHRNGP07510 517 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SERPINA6P08185 405 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 RPS17P08708 135 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 GSTM1P09488 218 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ENO3P13929 434 aaPredicted RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 SAT1P21673 171 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 DRD1P21728 446 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 C5AR1P21730 350 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 DGKAP23743 735 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CCR7P32248 378 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CTHP32929 405 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 GGT5P36269 586 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TRIM23P36406 574 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ETV3P41162 512 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 P2RY2P41231 377 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LIG3P49916 1009 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 IDH3AP50213 366 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 RPL14P50914 215 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 HK3P52790 923 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 INHBCP55103 352 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TAS2R38P59533 333 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 MRPS21P82921 87 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 CDKL1Q00532 357 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SATB1Q01826 763 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 GSTM4Q03013 218 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 KDSRQ06136 332 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ARHGEF7Q14155 803 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 PCBP2Q15366 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
MSH5-217ENST00000494458 TSNQ15631 228 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 SMAD2Q15796 467 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 AAK1Q2M2I8 961 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 KHDC1Q4VXA5 237 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 SH2D4BQ5SQS7 431 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LDLRAP1Q5SW96 308 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 PLEKHS1Q5SXH7 462 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 AGBL4Q5VU57 503 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ERAP2Q6P179 960 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TXNDC11Q6PKC3 985 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SERPINA13PQ6UXR4 307 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 RNF165Q6ZSG1 346 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ASRGL1Q7L266 308 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CLNKQ7Z7G1 428 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 CLDN19Q8N6F1 224 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 OTUD6BQ8N6M0 293 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ZNF366Q8N895 744 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ZNF781Q8N8C0 355 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SIDT2Q8NBJ9 832 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 PDPRQ8NCN5 879 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LKAAEAR1Q8TD35 194 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ASB12Q8WXK4 309 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SCAMP4Q969E2 229 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 GLYATL1Q969I3 302 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 COX14Q96I36 57 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LINC00615Q96LM1 132 aaPredicted RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 TMEM237Q96Q45 408 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LRRC37BQ96QE4 947 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 PANX3Q96QZ0 392 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CCDC106Q9BWC9 280 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TMEM120AQ9BXJ8 343 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 WWP1Q9H0M0 922 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ZNF385DQ9H6B1 395 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ALG9Q9H6U8 611 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ACTR5Q9H9F9 607 aaPredicted RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 KCNK12Q9HB15 430 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 SLC2A4RGQ9NR83 387 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 GULP1Q9UBP9 304 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 ZDHHC2Q9UIJ5 367 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 LNPEPQ9UIQ6 1025 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CRLS1Q9UJA2 301 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TRMT6Q9UJA5 497 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 PTBP2Q9UKA9 531 aaKnown RBP6.7□□□□□ -1.34
MSH5-217ENST00000494458 FAM50BQ9Y247 325 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 CKAP5Q14008 2032 aa6.7□□□□□ -1.34
MSH5-217ENST00000494458 TCF20Q9UGU0 1960 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 C17orf113A0A1B0GUU1 675 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 SLC5A10A0PJK1 596 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 IQCF5A8MTL0 148 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 A8MX80 341 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 C1QTNF3-AMACRE9PGA6 284 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 CDC7O00311 574 aa6.69□□□□□ -1.34
MSH5-217ENST00000494458 KPNA3O00505 521 aaPredicted RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 UBFD1O14562 309 aaKnown RBP6.69□□□□□ -1.34
MSH5-217ENST00000494458 SLC16A5O15375 505 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms