RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MINDY1Q8N5J2 469 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 POC1AQ8NBT0 407 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 LILRB1Q8NHL6 650 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 SPATA3Q8NHX4 192 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FIG4Q92562 907 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 TANKQ92844 425 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FAM162AQ96A26 154 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 SAT2Q96F10 170 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 RRNAD1Q96FB5 475 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 CFAP57Q96MR6 1250 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 JAKMIP1Q96N16 626 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 WDFY2Q96P53 400 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 INPP4AQ96PE3 977 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 GCNAQ96QF7 691 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 HGH1Q9BTY7 390 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 C1QTNF5Q9BXJ0 243 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 C1QTNF1Q9BXJ1 281 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 MRPL9Q9BYD2 267 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 OSGEPL1Q9H4B0 414 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 DDX31Q9H8H2 851 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 EVA1AQ9H8M9 152 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 EBF2Q9HAK2 575 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 RANGRFQ9HD47 186 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 LTB4R2Q9NPC1 389 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PSD3Q9NYI0 1048 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 OGFRQ9NZT2 677 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 C5AR2Q9P296 337 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FBXL17Q9UF56 701 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 RASAL2Q9UJF2 1139 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 ANAPC2Q9UJX6 822 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 FBXW11Q9UKB1 542 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 GTF3C4Q9UKN8 822 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 ACAD8Q9UKU7 415 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 PADI1Q9ULC6 663 aa2.35□□□□□ -2.03
LMNB1-207ENST00000494185 EXO1Q9UQ84 846 aaKnown RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 ZFP37Q9Y6Q3 630 aaPredicted RBP2.35□□□□□ -2.03
LMNB1-207ENST00000494185 A0A0G2JPF8 293 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 hCG_1809904A0A1W2PP81 198 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 A0A1W2PPE2 198 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 A0A1W2PR64 198 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ANKRD66B4E2M5 251 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPCL3B7ZW38 293 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 SOCS6O14544 535 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HS6ST1O60243 411 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 MITFO75030 526 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HIST1H2ABP04908 130 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ABCB1P08183 1280 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 SRPRAP08240 638 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPCL4P0DMR1 293 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ATP6V1B1P15313 513 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF12P17014 697 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HIST1H2ADP20671 130 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 PON1P27169 355 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 SSTR2P30874 369 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 TNNT3P45378 269 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 FMO5P49326 533 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 AMPHP49418 695 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 RGS19P49795 217 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CAMPP49913 170 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 STAT2P52630 851 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 MFAP4P55083 255 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPH2P55795 449 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ERVFC1-1P60608 527 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 MRPS5P82675 430 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 MRPS34P82930 218 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 SLC20A2Q08357 652 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZRSR1Q15695 479 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZSCAN23Q3MJ62 389 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF718Q3SXZ3 478 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CRY2Q49AN0 593 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CCDC92Q53HC0 331 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF628Q5EBL2 1059 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CCNYL2Q5T2Q4 361 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ACSM2BQ68CK6 577 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 PMS2CLQ68D20 193 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 PLBD1Q6P4A8 553 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 WDR73Q6P4I2 378 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 DCLRE1AQ6PJP8 1040 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CFAP77Q6ZQR2 320 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 SEPT14Q6ZU15 432 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 HIST3H2AQ7L7L0 130 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 KBTBD6Q86V97 674 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZSCAN30Q86W11 494 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 MCEMP1Q8IX19 187 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 RNF168Q8IYW5 571 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 PGBD5Q8N414 524 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF713Q8N859 430 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 PPFIBP2Q8ND30 876 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 OR14L1PQ8NHC6 308 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 DEPDC1BQ8WUY9 529 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 CD101Q93033 1021 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 IGSF8Q969P0 613 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF622Q969S3 477 aaKnown RBP eCLIP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 LRRC59Q96AG4 307 aaKnown RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 RMDN1Q96DB5 314 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ARSGQ96EG1 525 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 DGAT2Q96PD7 388 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 RAB3IPQ96QF0 476 aaPredicted RBP2.34□□□□□ -2.03
LMNB1-207ENST00000494185 OR2A14Q96R47 310 aa2.34□□□□□ -2.03
LMNB1-207ENST00000494185 ABHD1Q96SE0 405 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms