RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PYDC2Q56P42 97 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 FAM124AQ86V42 546 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 RALGPS2Q86X27 583 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 ZNF563Q8TA94 476 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CENPNQ96H22 339 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 APOLD1Q96LR9 279 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CNTN6Q9UQ52 1028 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 IRAK3Q9Y616 596 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 LRRC72A6NJI9 287 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CHRNGP07510 517 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CMPK1P30085 196 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 FOXN2P32314 431 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 MED22Q15528 200 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 KCNA10Q16322 511 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 ESRP1Q6NXG1 681 aaKnown RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 RTL4Q6ZR62 310 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CLHC1Q8NHS4 586 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 MYOCQ99972 504 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 FZD8Q9H461 694 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 IPPKQ9H8X2 491 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 IFT80Q9P2H3 777 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TREHO43280 583 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TNFRSF21O75509 655 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 DAOAP59103 153 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 OR6K2Q8NGY2 324 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 SLC35B2Q8TB61 432 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 C10orf82Q8WW14 230 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 PCED1BQ96HM7 432 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 MCMBPQ9BTE3 642 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TMEM27Q9HBJ8 222 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 DTLQ9NZJ0 730 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 SLIT2O94813 1529 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CLDN9O95484 217 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 C22orf31O95567 290 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 OR4Q2P0C623 313 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 LARS2Q15031 903 aaKnown RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 SLC10A6Q3KNW5 377 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 IL23RQ5VWK5 629 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 GET4Q7L5D6 327 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TMPRSS11BQ86T26 416 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 CNPPD1Q9BV87 410 aa18.98■□□□□ 0.63
COL27A1-207ENST00000494090 EVLQ9UI08 416 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-207ENST00000494090 TOP3BO95985 862 aaKnown RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 PTPN2P17706 415 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ITPKBP27987 946 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 CLCNKBP51801 687 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ILF3Q12906 894 aaKnown RBP eCLIP18.97■□□□□ 0.636e-8■■■■□ 21.5
COL27A1-207ENST00000494090 PSRC1Q6PGN9 363 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 FSTL5Q8N475 847 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 FAM98AQ8NCA5 519 aaKnown RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 FAM81AQ8TBF8 368 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ALG2Q9H553 416 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ELL3Q9HB65 397 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 U3KQV3 271 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 TAF4O00268 1085 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 CLDN4O14493 209 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ERVK-21P61565 698 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 LPIN1Q14693 890 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 DPYSL2Q16555 572 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 SLCO6A1Q86UG4 719 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ACAT2Q9BWD1 397 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 SEPT4O43236 478 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ASLP04424 464 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 THRBP10828 461 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ITPKAP23677 461 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 RPS9P46781 194 aaKnown RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 PSMD8P48556 350 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 SRP54P61011 504 aaKnown RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 HNRNPDQ14103 355 aaKnown RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 LDB1Q86U70 411 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 NAT8LQ8N9F0 302 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 CAPSLQ8WWF8 208 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 METTL21AQ8WXB1 218 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 GULP1Q9UBP9 304 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 DPPA5A6NC42 116 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 TULP3O75386 442 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 CDH3P22223 829 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 IGFBP5P24593 272 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 ATXN7L2Q5T6C5 722 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-207ENST00000494090 RIPOR3Q96MK2 946 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 PCBD2Q9H0N5 130 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 UBAP1Q9NZ09 502 aa18.97■□□□□ 0.63
COL27A1-207ENST00000494090 PTPRJQ12913 1337 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 SOWAHBA6NEL2 793 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 TMEM63AO94886 807 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 EPHX1P07099 455 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 DMPKQ09013 629 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 DCAF12L1Q5VU92 463 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 DAW1Q8N136 415 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 PIH1D2Q8WWB5 315 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 ABHD14A-ACY1A0A1B0GW23 586 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 ADAMTS3O15072 1205 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 MAGEB3O15480 346 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 ELNP15502 786 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 RASSF5Q8WWW0 418 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 RAD51AP1Q96B01 352 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 CHID1Q9BWS9 393 aa18.96■□□□□ 0.63
COL27A1-207ENST00000494090 PDP1Q9P0J1 537 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-207ENST00000494090 GRIN2DO15399 1336 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms