RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	OR52N1	Q8NH53	320 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	TTC8	Q8TAM2	541 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	PHF21A	Q96BD5	680 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	C18orf8	Q96DM3	657 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	LZTFL1	Q9NQ48	299 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	MARCH2	Q9P0N8	246 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	WNT6	Q9Y6F9	365 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	DLL1	O00548	723 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZBTB24	O43167	697 aa	Predicted RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	MSI1	O43347	362 aa	Known RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	CIDEA	O60543	219 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	CDC123	O75794	336 aa	Predicted RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	UNC5C	O95185	931 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	CAPN3	P20807	821 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	PRKCI	P41743	596 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	PTPN5	P54829	565 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	TNK2	Q07912	1038 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	TAF5	Q15542	800 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	DCAF6	Q58WW2	860 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	HES5	Q5TA89	166 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	SETD3	Q86TU7	594 aa	Predicted RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	ANKFN1	Q8N957	763 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	RAB3IL1	Q8TBN0	382 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	CSGALNACT1	Q8TDX6	532 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	HPS1	Q92902	700 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	IRF7	Q92985	503 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	TMEM80	Q96HE8	168 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	MRPS26	Q9BYN8	205 aa	Known RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	LIN28A	Q9H9Z2	209 aa	Known RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	OLA1	Q9NTK5	396 aa	Known RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	WWOX	Q9NZC7	414 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	STX18	Q9P2W9	335 aa	Known RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	NAALADL1	Q9UQQ1	740 aa		11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919	WBP11	Q9Y2W2	641 aa	Known RBP	11.5	□□□□□ -0.57
BRCA1-222	ENST00000493919		J3KRW8	73 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	MFAP3L	O75121	409 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	OR7A10	O76100	309 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	SUN1	O94901	812 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	CNOT4	O95628	575 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	UNG	P13051	313 aa	Predicted RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	SERPINB5	P36952	375 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	ARL1	P40616	181 aa	Predicted RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	HOXA1	P49639	335 aa	Predicted RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	ADK	P55263	362 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	RNASE9	P60153	205 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	TBX2	Q13207	712 aa	Predicted RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	PIK3R6	Q5UE93	754 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	XYLT1	Q86Y38	959 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	CLEC4F	Q8N1N0	589 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	CBARP	Q8N350	705 aa	Predicted RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	ARFGAP1	Q8N6T3	406 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	NIPA2	Q8N8Q9	360 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	TSEN2	Q8NCE0	465 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	CATSPER1	Q8NEC5	780 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	AHCYL2	Q96HN2	611 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	CCM2	Q9BSQ5	444 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	DCLK3	Q9C098	648 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	EBF3	Q9H4W6	596 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	ARMC7	Q9H6L4	198 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	POPDC2	Q9HBU9	364 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	HEBP1	Q9NRV9	189 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	DUS2	Q9NX74	493 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	GTSE1	Q9NYZ3	720 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	LSM7	Q9UK45	103 aa	Known RBP	11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	SESN1	Q9Y6P5	492 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	COL4A3	Q01955	1670 aa		11.49	□□□□□ -0.57
BRCA1-222	ENST00000493919	RAB19	A4D1S5	217 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	FAM221B	A6H8Z2	402 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919		F8W036	122 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919		H3BM21	787 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TXNDC9	O14530	226 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	CHAD	O15335	359 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	NUAK1	O60285	661 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SERPING1	P05155	500 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	PLEK	P08567	350 aa	Predicted RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	MAOB	P27338	520 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	OR3A3	P47888	321 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	YWHAZ	P63104	245 aa	Known RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SLC6A3	Q01959	620 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SIGLEC14	Q08ET2	396 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	LRRC36	Q1X8D7	754 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ANKRD20A4	Q4UJ75	823 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	HGSNAT	Q68CP4	663 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TTC7B	Q86TV6	843 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	DEFB106A	Q8N104	65 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SLC35F6	Q8N357	371 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	KLHL36	Q8N4N3	616 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	FAM13C	Q8NE31	585 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	METTL6	Q8TCB7	284 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SYN2	Q92777	582 aa	Predicted RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	EDA	Q92838	391 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	WBP2	Q969T9	261 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SYT11	Q9BT88	431 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	KLF16	Q9BXK1	252 aa	Predicted RBP	11.48	□□□□□ -0.57

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