RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MID1IP1Q9NPA3 183 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 ATXN10Q9UBB4 475 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 NPEPPSL1A6NEC2 478 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CLASP2O75122 1294 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 GPC4O75487 556 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 ECI2O75521 394 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CLPTM1O96005 669 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 LINC00271P0C7V0 271 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 PTGER3P43115 390 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CACNG1Q06432 222 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 DYNC1I2Q13409 638 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 LRP8Q14114 963 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 SQLEQ14534 574 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 UGT3A2Q3SY77 523 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 NEK10Q6ZWH5 1172 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 KREMEN2Q8NCW0 462 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 ANKK1Q8NFD2 765 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 MPP4Q96JB8 637 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 KIAA1522Q9P206 1035 aaPredicted RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 SYCE1LA8MT33 242 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 C9JVG2 144 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 BTN3A1O00481 513 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 HNRNPCP07910 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
VCP-207ENST00000493886 HSPA1AP0DMV8 641 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 HSPA1BP0DMV9 641 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 CHRM3P20309 590 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CD70P32970 193 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 ADARP55265 1226 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 BCL2L1Q07817 233 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 ELMOD1Q8N336 334 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 FIBINQ8TAL6 211 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 CD200R1Q8TD46 325 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 KCNJ9Q92806 393 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 FUBP1Q96AE4 644 aaKnown RBP13.63□□□□□ -0.23
VCP-207ENST00000493886 C19orf60Q96EN9 201 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 BTBD9Q96Q07 612 aa13.63□□□□□ -0.23
VCP-207ENST00000493886 TMEM247A6NEH6 219 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 ZBBXA8MT70 800 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 E7ENX8 843 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 LEFTY2O00292 366 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 TSPAN12O95859 305 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 ESR1P03372 595 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 ADH1AP07327 375 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 FGF4P08620 206 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 EEF1DP29692 281 aaKnown RBP13.62□□□□□ -0.23
VCP-207ENST00000493886 GKP32189 559 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 MYBPC1Q00872 1141 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 PLEKHG6Q3KR16 790 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 NADK2Q4G0N4 442 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 AGKQ53H12 422 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 LARP4Q71RC2 724 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■□□□□ 9.7
VCP-207ENST00000493886 STK40Q8N2I9 435 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 HMGCLL1Q8TB92 370 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 TRPC4APQ8TEL6 797 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 SLC46A2Q9BY10 475 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 SMG9Q9H0W8 520 aaKnown RBP13.62□□□□□ -0.23
VCP-207ENST00000493886 DDX18Q9NVP1 670 aaKnown RBP13.62□□□□□ -0.23
VCP-207ENST00000493886 DNAJC15Q9Y5T4 150 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 COMMD10Q9Y6G5 202 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 E5RI56 91 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 HTRA2O43464 458 aaPredicted RBP13.62□□□□□ -0.23
VCP-207ENST00000493886 TFAP2AP05549 437 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 BMP1P13497 986 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 CSNK1DP48730 415 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 IL2P60568 153 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 RPL26P61254 145 aaKnown RBP13.62□□□□□ -0.23
VCP-207ENST00000493886 GEN1Q17RS7 908 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 SLC22A17Q8WUG5 538 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 EEF1AKMT1Q8WVE0 214 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.62□□□□□ -0.235e-7■■■■■ 55
VCP-207ENST00000493886 EME1Q96AY2 570 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 C3orf30Q96M34 536 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 P2RY12Q9H244 342 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 VCX3AQ9NNX9 186 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 ABCB8Q9NUT2 735 aa13.62□□□□□ -0.23
VCP-207ENST00000493886 INTS6Q9UL03 887 aaKnown RBP13.62□□□□□ -0.23
VCP-207ENST00000493886 A0A0J9YYE9 177 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 AZIN1O14977 448 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 TRBC1P01850 177 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 MAPK8P45983 427 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 PSME3P61289 254 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 CLCQ05315 142 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 FASTKQ14296 549 aaKnown RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 FBXO48Q5FWF7 155 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 AMIGO2Q86SJ2 522 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 CPNE9Q8IYJ1 553 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 FAM110BQ8TC76 370 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 LINGO1Q96FE5 620 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 SLC45A3Q96JT2 553 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 TNKS2Q9H2K2 1166 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms