RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 BPIP17213 487 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 CCL11P51671 97 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 DCDC1P59894 354 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 NOTCH2Q04721 2471 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 PCSK7Q16549 785 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 UGT8Q16880 541 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 AGAP9Q5VTM2 703 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 FAM69BQ5VUD6 431 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 SIDT2Q8NBJ9 832 aaKnown RBP13.43□□□□□ -0.26
SAMM50-204ENST00000493161 FAF2Q96CS3 445 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 HDAC11Q96DB2 347 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 CXorf40BQ96DE9 158 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 ZNF670Q9BS34 389 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 ADGRE3Q9BY15 652 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 BPIFA1Q9NP55 256 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 PDE7BQ9NP56 450 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 MLXIPLQ9NP71 852 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 SEMA5BQ9P283 1151 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 RARRES3Q9UL19 164 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 SPO11Q9Y5K1 396 aa13.43□□□□□ -0.26
SAMM50-204ENST00000493161 SPTBN1Q01082 2364 aaKnown RBP13.42□□□□□ -0.26
SAMM50-204ENST00000493161 A0A087X0T9 212 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 MYO1FO00160 1098 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 MT-ND3P03897 115 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 FAM228BP0C875 321 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 IDSP22304 550 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 COL8A1P27658 744 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 PTPN4P29074 926 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 CA5AP35218 305 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 PGDP52209 483 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 HADHQ16836 314 aaKnown RBP13.42□□□□□ -0.26
SAMM50-204ENST00000493161 LCN10Q6JVE6 187 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 WASH2PQ6VEQ5 465 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 FAM83HQ6ZRV2 1179 aaPredicted RBP13.42□□□□□ -0.26
SAMM50-204ENST00000493161 SLC38A9Q8NBW4 561 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 IMP4Q96G21 291 aaKnown RBP13.42□□□□□ -0.26
SAMM50-204ENST00000493161 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 SLC25A23Q9BV35 468 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 GPR63Q9BZJ6 419 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 RAB33BQ9H082 229 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 MAGEE1Q9HCI5 957 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 WASH6PQ9NQA3 447 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 NFKBIL1Q9UBC1 381 aaPredicted RBP13.42□□□□□ -0.26
SAMM50-204ENST00000493161 PSMD13Q9UNM6 376 aa13.42□□□□□ -0.26
SAMM50-204ENST00000493161 SHANK1Q9Y566 2161 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 TCP11X1B4DZS4 312 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 DDX3YO15523 660 aaKnown RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 GPR39O43194 453 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 VEGFDO43915 354 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 FECHP22830 423 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 PTGIRP43119 386 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 TYRO3Q06418 890 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 TMEM115Q12893 351 aaPredicted RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 MRPL49Q13405 166 aaKnown RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 PDK2Q15119 407 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 INPP5JQ15735 1006 aaPredicted RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 GPR19Q15760 415 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 EIF2S3LQ2VIR3 472 aaKnown RBP13.41□□□□□ -0.26
SAMM50-204ENST00000493161 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 ATP13A5Q4VNC0 1218 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 PRAMEF17Q5VTA0 474 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 ZNF787Q6DD87 383 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 TRAPPC5Q8IUR0 188 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 RAPGEF5Q92565 580 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 TADA1Q96BN2 335 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 GPR87Q9BY21 358 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 MFRPQ9BY79 579 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 ING2Q9H160 280 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 CASS4Q9NQ75 786 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 FGF21Q9NSA1 209 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 HAUS2Q9NVX0 235 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 MYO9AB2RTY4 2548 aa13.41□□□□□ -0.26
SAMM50-204ENST00000493161 MT-CYBP00156 380 aaPredicted RBP13.4□□□□□ -0.26
SAMM50-204ENST00000493161 MX2P20592 715 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 CDK18Q07002 472 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 GPS2Q13227 327 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 NOMO1Q15155 1222 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 RPE65Q16518 533 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 PAPD7Q5XG87 772 aaKnown RBP13.4□□□□□ -0.26
SAMM50-204ENST00000493161 PDPK2PQ6A1A2 396 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 SYVN1Q86TM6 617 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 RBM12BQ8IXT5 1001 aaKnown RBP13.4□□□□□ -0.26
SAMM50-204ENST00000493161 TTC30BQ8N4P2 665 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 PLD5Q8N7P1 536 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 Q8NA96 180 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 THAP4Q8WY91 577 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 UBXN4Q92575 508 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 MR1Q95460 341 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 ZNF514Q96K75 400 aaPredicted RBP13.4□□□□□ -0.26
SAMM50-204ENST00000493161 PPM1MQ96MI6 270 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 AGAP3Q96P47 875 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 FCRL4Q96PJ5 515 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
SAMM50-204ENST00000493161 ACSS2Q9NR19 701 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms