RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IDSP22304 550 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 CHRNA4P43681 627 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 MARCKSL1P49006 195 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 CYP4F2P78329 520 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 ABHD18Q0P651 414 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 IL11RAQ14626 422 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 CLCA4Q14CN2 919 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 NOMO1Q15155 1222 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 LDLRAP1Q5SW96 308 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 METRNLQ641Q3 311 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 CRTC3Q6UUV7 619 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 CEACAM20Q6UY09 585 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 PID1Q7Z2X4 250 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 PRSS42Q7Z5A4 293 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 CACNA2D3Q8IZS8 1091 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 NLGN4XQ8N0W4 816 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 RASGEF1AQ8N9B8 481 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 NLGN4YQ8NFZ3 816 aaPredicted RBP8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 KRT35Q92764 455 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 PANX2Q96RD6 677 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 TRIT1Q9H3H1 467 aaKnown RBP8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 GOLPH3Q9H4A6 298 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF768Q9H5H4 540 aaKnown RBP8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 PCDHA3Q9Y5H8 950 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 BSNQ9UPA5 3926 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 PTPN13Q12923 2485 aa8.23□□□□□ -1.09
SMARCB1-207ENST00000491967 MAST4O15021 2626 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 FLNCQ14315 2725 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 KLHL33A6NCF5 533 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 RCCD1A6NED2 376 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 C5orf60A6NFR6 353 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 A8MU76 341 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 POLR1CO15160 346 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 SGTAO43765 313 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A9O60656 530 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 POP7O75817 140 aaKnown RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 STK17BO94768 372 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UBXN7O94888 489 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 VIPP01282 170 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 FAM87AP0C7U9 286 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 FGF5P12034 268 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A6P19224 532 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A1P22309 533 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A4P22310 534 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 PSMA3P25788 255 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 CTNNA1P35221 906 aaKnown RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 SPAM1P38567 509 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 STAT5AP42229 794 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 CAPZBP47756 277 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 CTSCP53634 463 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 GFERP55789 205 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 GPR18Q14330 331 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 CHRNA6Q15825 494 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF658BQ4V348 819 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 GPRC6AQ5T6X5 926 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 FAM83HQ6ZRV2 1179 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 ZC3H18Q86VM9 953 aaKnown RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 AMZ2Q86W34 360 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 FAM129CQ86XR2 697 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 IL22RA1Q8N6P7 574 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 LRRC57Q8N9N7 239 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 RNF214Q8ND24 703 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 ZFPM2Q8WW38 1151 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 JPH3Q8WXH2 748 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 RBM41Q96IZ5 413 aaKnown RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 SLC41A2Q96JW4 573 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 ZNF514Q96K75 400 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 LINC00615Q96LM1 132 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 CATSPER2Q96P56 530 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 FCRL4Q96PJ5 515 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 EFHD1Q9BUP0 239 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 GBA3Q9H227 469 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A7Q9HAW7 530 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A10Q9HAW8 530 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 UGT1A8Q9HAW9 530 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 ARNT2Q9HBZ2 717 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 APMAPQ9HDC9 416 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 BPIFA1Q9NP55 256 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 TFR2Q9UP52 801 aa8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 REXO2Q9Y3B8 237 aaKnown RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 EPN1Q9Y6I3 576 aaPredicted RBP8.22□□□□□ -1.09
SMARCB1-207ENST00000491967 MED13Q9UHV7 2174 aa8.21□□□□□ -1.09
SMARCB1-207ENST00000491967 GLYATL1P3A0A0U1RQE8 302 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 LOC101059948A0A1B0GTJ6 334 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 OR52A4PA6NMU1 304 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF891A8MT65 544 aaPredicted RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 NKX2-8O15522 239 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 PJA2O43164 708 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ANXA9O76027 345 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 AGTP01019 485 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 TNNT1P13805 278 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 VCLP18206 1134 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 NELFEP18615 380 aaKnown RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 CTNNA2P26232 953 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 RPL10P27635 214 aaKnown RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 RBL1P28749 1068 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 LEPRP48357 1165 aaKnown RBP8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 XIAPP98170 497 aa8.21□□□□□ -1.1
SMARCB1-207ENST00000491967 ITGA9Q13797 1035 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms