RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RAI2Q9Y5P3 530 aa9.35□□□□□ -0.91
BRCA1-219ENST00000491747 CAPN14A8MX76 684 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 OPHN1O60890 802 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TM7SF2O76062 418 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 PGLSO95336 258 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ENO1P06733 434 aaKnown RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 SNRPAP09012 282 aaKnown RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 C6P13671 934 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 PTPN3P26045 913 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 C21orf59P57076 290 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ELP6Q0PNE2 266 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 RALGPS1Q5JS13 557 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TPRG1LQ5T0D9 272 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ABI3BPQ7Z7G0 1075 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CTAGE3PQ8IX95 158 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 SLC22A18ASQ8N1D0 253 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TP53I13Q8NBR0 393 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 RBM15BQ8NDT2 890 aaKnown RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 RAB3IL1Q8TBN0 382 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TFB1MQ8WVM0 346 aaKnown RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CAMK1GQ96NX5 476 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 AGAP3Q96P47 875 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 LENG8Q96PV6 779 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 NDE1Q9NXR1 346 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ETAA1Q9NY74 926 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TAGLN3Q9UI15 199 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 PLLPQ9Y342 182 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 KLHL33A6NCF5 533 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ANKRD33BA6NCL7 494 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TRIM49D1C9J1S8 452 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 GIPC1O14908 333 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ALPIP09923 528 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 THEGLP0DJG4 465 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ANPEPP15144 967 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CTPS1P17812 591 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 SDHBP21912 280 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 AKT2P31751 481 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CD68P34810 354 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 IGFALSP35858 605 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CD86P42081 329 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CPA2P48052 419 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 SUOXP51687 545 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ACTR3P61158 418 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 SGCGQ13326 291 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 NOMO1Q15155 1222 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TEX44Q53QW1 395 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 LIPIQ6XZB0 460 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 DPPA4Q7L190 304 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 CRLF3Q8IUI8 442 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 IGDCC3Q8IVU1 814 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 ASB12Q8WXK4 309 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 KLHDC7BQ96G42 594 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TDRD1Q9BXT4 1180 aaKnown RBP9.34□□□□□ -0.91
BRCA1-219ENST00000491747 C1orf21Q9H246 121 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 TM7SF3Q9NS93 570 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 B4GALT6Q9UBX8 382 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 HS3ST3A1Q9Y663 406 aa9.34□□□□□ -0.91
BRCA1-219ENST00000491747 KNL1Q8NG31 2342 aa9.34□□□□□ -0.92
BRCA1-219ENST00000491747 LRP4O75096 1905 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 NPIPB15A6NHN6 443 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-219ENST00000491747 FKBP6O75344 327 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 CER1O95813 267 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 LHCGRP22888 699 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 POLE2P56282 527 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 POLR2LP62875 67 aaKnown RBP9.33□□□□□ -0.92
BRCA1-219ENST00000491747 BST1Q10588 318 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 CBLBQ13191 982 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 KCNJ11Q14654 390 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 WSCD2Q2TBF2 565 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 ARMC12Q5T9G4 340 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 C1orf146Q5VVC0 180 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 ERAP2Q6P179 960 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 DARS2Q6PI48 645 aaKnown RBP9.33□□□□□ -0.92
BRCA1-219ENST00000491747 IL27RAQ6UWB1 636 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 IZUMO2Q6UXV1 221 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 RIPOR1Q6ZS17 1223 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 Q6ZSR6 202 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 PIP4P1Q86T03 277 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 TSPAN33Q86UF1 283 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 IQCHQ86VS3 1027 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 ULK2Q8IYT8 1036 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 PPM1NQ8N819 430 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 SPATA22Q8NHS9 363 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 TADA1Q96BN2 335 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 MTBPQ96DY7 904 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 QKIQ96PU8 341 aaKnown RBP eCLIP9.33□□□□□ -0.92
BRCA1-219ENST00000491747 THTPAQ9BU02 230 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 BRD8Q9H0E9 1235 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 MKS1Q9NXB0 559 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 SIRPGQ9P1W8 387 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 PPIL1Q9Y3C6 166 aa9.33□□□□□ -0.92
BRCA1-219ENST00000491747 A0A1B0GTQ1 180 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 SH3BP5O60239 455 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 KRT38O76015 456 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 MT-CYBP00156 380 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms