RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 CLPPQ16740 277 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 ATP13A5Q4VNC0 1218 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 ANKRD20A2Q5SQ80 823 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 ARHGAP40Q5TG30 622 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 ANKRD20A1Q5TYW2 823 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 ANKRD20A3Q5VUR7 823 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC25A41Q8N5S1 370 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 TMEM159Q96B96 161 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 CCDC74BQ96LY2 380 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 SPATA13Q96N96 652 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 DDX47Q9H0S4 455 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 IL26Q9NPH9 171 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 PRDM8Q9NQV8 689 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 PDP2Q9P2J9 529 aa12.52□□□□□ -0.41
SEC61A1-206ENST00000491668 TEX51A0A1B0GUA7 166 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 C5orf60A6NFR6 353 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 K7ENP7 123 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 BUD23O43709 281 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 AGTP01019 485 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 THRAP10827 490 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 FGF3P11487 239 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 F3P13726 295 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 UCNP55089 124 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 UBE2IP63279 158 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 MSLNQ13421 630 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 OLIG2Q13516 323 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 PEX6Q13608 980 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 PTPRCAPQ14761 206 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 PPP1R7Q15435 360 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 CYP1B1Q16678 543 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 P3H1Q32P28 736 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 PDPK2PQ6A1A2 396 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 INO80CQ6PI98 192 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 CRTC3Q6UUV7 619 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 C11orf96Q7Z7L8 435 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 SPATA4Q8NEY3 305 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 OR4D9Q8NGE8 314 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 USP7Q93009 1102 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 LRRC45Q96CN5 670 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 PLEKHG4BQ96PX9 1271 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 CMKLR1Q99788 373 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 SARS2Q9NP81 518 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 KCNK4Q9NYG8 393 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 IL17CQ9P0M4 197 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 SDK2Q58EX2 2172 aa12.51□□□□□ -0.41
SEC61A1-206ENST00000491668 TLN1Q9Y490 2541 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 E7EVH7 732 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 HGSO14964 777 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 SNX2O60749 519 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 ANXA9O76027 345 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 BRAFP15056 766 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 WT1P19544 449 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 ADRA1AP35348 466 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 LMAN1P49257 510 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 CLCNKAP51800 687 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 MAPK10P53779 464 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 GDF10P55107 478 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 HHEXQ03014 270 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 C2orf54Q08AI8 447 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 NFATC2Q13469 925 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 CHRNA6Q15825 494 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 PLA2G4EQ3MJ16 856 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 BROXQ5VW32 411 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 TMEM71Q6P5X7 295 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 RANBP10Q6VN20 620 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 DTX1Q86Y01 620 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 TAB3Q8N5C8 712 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 CEP112Q8N8E3 955 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 TTC9Q92623 222 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 CCDC97Q96F63 343 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 PPP1R2P1Q96PQ5 205 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 KRT12Q99456 494 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 GBA3Q9H227 469 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 RAD18Q9NS91 495 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 KLC4Q9NSK0 619 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 PAK5Q9P286 719 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 ZNF624Q9P2J8 865 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 CPNE7Q9UBL6 633 aa12.5□□□□□ -0.41
SEC61A1-206ENST00000491668 CTAGE15A4D2H0 777 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 GPR89AB7ZAQ6 455 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A9O60656 530 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 KRT14P02533 472 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 GPR89BP0CG08 455 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 CTAGE8P0CG41 777 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 ZNF7P17097 686 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A6P19224 532 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A1P22309 533 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A4P22310 534 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 PSMB4P28070 264 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A3P35503 534 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms