RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DARS2Q6PI48 645 aaKnown RBP17.71■□□□□ 0.43
HMGN1-219ENST00000491183 CDKL3Q8IVW4 592 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-219ENST00000491183 ZNF843Q8N446 348 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 RASGEF1AQ8N9B8 481 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 JPH3Q8WXH2 748 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-219ENST00000491183 APOL2Q9BQE5 337 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 FSD1LQ9BXM9 530 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 SEMA4CQ9C0C4 833 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 ZMYND15Q9H091 742 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 UCK1Q9HA47 277 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 SLC39A1Q9NY26 324 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 PCDHB11Q9Y5F2 797 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 ARL5AQ9Y689 179 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 SLC30A1Q9Y6M5 507 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 BAHCC1Q9P281 2608 aa17.71■□□□□ 0.43
HMGN1-219ENST00000491183 PDZK1P1A8MUH7 402 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 B4E171 279 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 TJP3O95049 919 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 VIPP01282 170 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 PSMB4P28070 264 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 TSPAN7P41732 249 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 CTSCP53634 463 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 DRG2P55039 364 aaKnown RBP17.7■□□□□ 0.42
HMGN1-219ENST00000491183 LY6DQ14210 128 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 MANEAQ5SRI9 462 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 AGAP9Q5VTM2 703 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 WASH2PQ6VEQ5 465 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 TMEM26Q6ZUK4 368 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 FAM129CQ86XR2 697 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 TRAPPC5Q8IUR0 188 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 AVL9Q8NBF6 648 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 CCDC110Q8TBZ0 833 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 NKD1Q969G9 470 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 DDA1Q9BW61 102 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 EPB41L1Q9H4G0 881 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 WASH6PQ9NQA3 447 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 WDR37Q9Y2I8 494 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 PKP3Q9Y446 797 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 KCTD3Q9Y597 815 aa17.7■□□□□ 0.42
HMGN1-219ENST00000491183 OR52A4PA6NMU1 304 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 STMND1H3BQB6 276 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 STX7O15400 261 aaKnown RBP17.69■□□□□ 0.42
HMGN1-219ENST00000491183 PPFIA2O75334 1257 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 POP7O75817 140 aaKnown RBP17.69■□□□□ 0.42
HMGN1-219ENST00000491183 IDSP22304 550 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 CETN2P41208 172 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 MC2RQ01718 297 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 GTF2H3Q13889 308 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 CLCA4Q14CN2 919 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 TAF1AQ15573 450 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-219ENST00000491183 LDLRAP1Q5SW96 308 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 GPRC6AQ5T6X5 926 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 ANKS6Q68DC2 871 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 DENND5AQ6IQ26 1287 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 CCDC112Q8NEF3 446 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 DDHD1Q8NEL9 900 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 ZNF398Q8TD17 642 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 SGF29Q96ES7 293 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 SPATA13Q96N96 652 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 TTC25Q96NG3 672 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 FERMT1Q9BQL6 677 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 SPRY4Q9C004 299 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 KLHL3Q9UH77 587 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
HMGN1-219ENST00000491183 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-219ENST00000491183 AAR2Q9Y312 384 aaKnown RBP17.69■□□□□ 0.42
HMGN1-219ENST00000491183 ZNF106Q9H2Y7 1883 aaKnown RBP17.69■□□□□ 0.42
HMGN1-219ENST00000491183 DDX3YO15523 660 aaKnown RBP17.68■□□□□ 0.42
HMGN1-219ENST00000491183 C9P02748 559 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 TYRP1P17643 537 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 LPOP22079 712 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-219ENST00000491183 GFERP55789 205 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 DMPKQ09013 629 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 ITGA9Q13797 1035 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 PRPSAP1Q14558 356 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 DCAF12Q5T6F0 453 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 TMEM220Q6QAJ8 160 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 FAM83HQ6ZRV2 1179 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-219ENST00000491183 PEX26Q7Z412 305 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 PLXDC1Q8IUK5 500 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 TRIM48Q8IWZ4 208 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 KLHDC8BQ8IXV7 354 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 OR4K2Q8NGD2 314 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 DESI2Q9BSY9 194 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 ASPSCR1Q9BZE9 553 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 SLC40A1Q9NP59 571 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 POT1Q9NUX5 634 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 SMOXQ9NWM0 555 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 PCDHGA4Q9Y5G9 962 aa17.68■□□□□ 0.42
HMGN1-219ENST00000491183 MN1Q10571 1320 aaPredicted RBP17.68■□□□□ 0.42
HMGN1-219ENST00000491183 C5orf60A6NFR6 353 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 OR2AG2A6NM03 316 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 C2orf81A6NN90 581 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 KCNJ13O60928 360 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 UBXN7O94888 489 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 FTCDO95954 541 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 VCLP18206 1134 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 RAB15P59190 212 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 XIAPP98170 497 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms