RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	JUP	P14923	745 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	ACRV1	P26436	265 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PAFAH1B1	P43034	410 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	MAGEA6	P43360	314 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	OR1D5	P58170	312 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	CACNG1	Q06432	222 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PCID2	Q5JVF3	399 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	C17orf82	Q86X59	251 aa	Predicted RBP	18.27	■□□□□ 0.52
C4A-256	ENST00000490663	CCNJL	Q8IV13	435 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	AGGF1	Q8N302	714 aa	eCLIP	18.27	■□□□□ 0.52
C4A-256	ENST00000490663	LILRA3	Q8N6C8	439 aa	Predicted RBP	18.27	■□□□□ 0.52
C4A-256	ENST00000490663	CLDN19	Q8N6F1	224 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	ULK4	Q96C45	1275 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	KRT12	Q99456	494 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	COPS8	Q99627	209 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	TRIM31	Q9BZY9	425 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	ZDHHC3	Q9NYG2	299 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	IL1RAPL1	Q9NZN1	696 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	BFAR	Q9NZS9	450 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	MARCH4	Q9P2E8	410 aa	Predicted RBP	18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PCYOX1	Q9UHG3	505 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	CLCA2	Q9UQC9	943 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PRSS21	Q9Y6M0	314 aa		18.27	■□□□□ 0.52
C4A-256	ENST00000490663	PRR19	A6NJB7	356 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	RHPN2P1	A8MT19	583 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	GPR89A	B7ZAQ6	455 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	GOLGA8K	D6RF30	607 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	GOLGA8T	H3BQL2	631 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	CS	O75390	466 aa	Known RBP	18.26	■□□□□ 0.51
C4A-256	ENST00000490663	GPR89B	P0CG08	455 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	F3	P13726	295 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	GLB1	P16278	677 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	PSMA3	P25788	255 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	NPY2R	P49146	381 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	PRAME	P78395	509 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	E2F1	Q01094	437 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	DR1	Q01658	176 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	ACVR1	Q04771	509 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	BIRC2	Q13490	618 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	RNASEH2B	Q5TBB1	312 aa	Known RBP	18.26	■□□□□ 0.51
C4A-256	ENST00000490663	IZUMO3	Q5VZ72	239 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	AFTPH	Q6ULP2	937 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	CCNI2	Q6ZMN8	369 aa	Predicted RBP	18.26	■□□□□ 0.51
C4A-256	ENST00000490663	SPRED1	Q7Z699	444 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	JAML	Q86YT9	394 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	GALNT15	Q8N3T1	639 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	NAT8L	Q8N9F0	302 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	MFSD3	Q96ES6	412 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	DCUN1D1	Q96GG9	259 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	CNTNAP3B	Q96NU0	1288 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	SERPINB12	Q96P63	405 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	18.26	■□□□□ 0.51
C4A-256	ENST00000490663	CNTNAP3	Q9BZ76	1288 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	WDR37	Q9Y2I8	494 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	MSRB2	Q9Y3D2	182 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	WDFY3	Q8IZQ1	3526 aa		18.26	■□□□□ 0.51
C4A-256	ENST00000490663	PMS2P1	A4D2B8	440 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	OR52A4P	A6NMU1	304 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	DNALI1	O14645	258 aa	Predicted RBP	18.25	■□□□□ 0.51
C4A-256	ENST00000490663	BRAF	P15056	766 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	ALDH4A1	P30038	563 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	PDX1	P52945	283 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	CDK16	Q00536	496 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	AMZ1	Q400G9	498 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	GPR33	Q49SQ1	333 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	CDCP2	Q5VXM1	449 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	NKAIN2	Q5VXU1	208 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	DUS1L	Q6P1R4	473 aa	Known RBP	18.25	■□□□□ 0.51
C4A-256	ENST00000490663	CASC4	Q6P4E1	433 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	XKR5	Q6UX68	686 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	TMPRSS9	Q7Z410	1059 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	B3GNT8	Q7Z7M8	397 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	AMZ2	Q86W34	360 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	TMPRSS12	Q86WS5	348 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	SFRP1	Q8N474	314 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	ZNF592	Q92610	1267 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	GATA6	Q92908	595 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	PWWP2A	Q96N64	755 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	FOXP3	Q9BZS1	431 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	IL22	Q9GZX6	179 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	LRRN3	Q9H3W5	708 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	TREX1	Q9NSU2	369 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	SOX13	Q9UN79	622 aa		18.25	■□□□□ 0.51
C4A-256	ENST00000490663	ACACA	Q13085	2346 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	IGLV3-16	A0A075B6K0	115 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	B4GAT1	O43505	415 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	OR1I1	O60431	355 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	ATP1B2	P14415	290 aa	Predicted RBP	18.24	■□□□□ 0.51
C4A-256	ENST00000490663	IVD	P26440	423 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	PPM1F	P49593	454 aa	Predicted RBP	18.24	■□□□□ 0.51
C4A-256	ENST00000490663	SPIDR	Q14159	915 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	IYD	Q6PHW0	289 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	NAPRT	Q6XQN6	538 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	PPIL6	Q8IXY8	311 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	OTUD6B	Q8N6M0	293 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	GPR150	Q8NGU9	434 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	OR4L1	Q8NH43	312 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	JPH3	Q8WXH2	748 aa	Predicted RBP	18.24	■□□□□ 0.51
C4A-256	ENST00000490663	SLCO2A1	Q92959	643 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	ZNF669	Q96BR6	464 aa	Predicted RBP	18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms