RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 DLGAP4Q9Y2H0 992 aa4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 RSF1Q96T23 1441 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P38-201ENST00000490557 TMEM189-UBE2V1I3L0A0 370 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 CAPN9O14815 690 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 MITFO75030 526 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF23P17027 643 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 MATR3P43243 847 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 HOXA1P49639 335 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 PITX1P78337 314 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 PPP2R2BQ00005 443 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 ACVR2BQ13705 512 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 IRF3Q14653 427 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 ASPRV1Q53RT3 343 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 RAD9BQ6WBX8 426 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 CLEC17AQ6ZS10 378 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 MCEMP1Q8IX19 187 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 C1orf52Q8N6N3 182 aaKnown RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 LMNTD1Q8N9Z9 388 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 SLC38A9Q8NBW4 561 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 OR52I2Q8NH67 350 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 NSUN4Q96CB9 384 aaKnown RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 LINGO1Q96FE5 620 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 PKP4Q99569 1192 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 ARHGEF38Q9NXL2 777 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 SUCLA2Q9P2R7 463 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 KCNG2Q9UJ96 466 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 FAF1Q9UNN5 650 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 ARHGEF40Q8TER5 1519 aa4.71□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZCWPW2A0A1B0GU75 182 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF500O60304 480 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF432O94892 652 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 BMP10O95393 424 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 CRYAAP02489 173 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 KRT19P08727 400 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 HRH2P25021 359 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 AHRP35869 848 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 EPS8Q12929 822 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 FAM76BQ5HYJ3 339 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 SIRPB2Q5JXA9 342 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 DSG4Q86SJ6 1040 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 GBGT1Q8N5D6 347 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 POC5Q8NA72 575 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 MCUQ8NE86 351 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 OXNAD1Q96HP4 312 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 NAP1L5Q96NT1 182 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 INPP4AQ96PE3 977 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 OSGEPL1Q9H4B0 414 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 UPF2Q9HAU5 1272 aaKnown RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 CHMP1AQ9HD42 196 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 KLHL1Q9NR64 748 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 PAG1Q9NWQ8 432 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF711Q9Y462 761 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 TMEM184BQ9Y519 407 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 PCDHGA5Q9Y5G8 931 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 DOCK7Q96N67 2140 aa4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF644Q9H582 1327 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P38-201ENST00000490557 TMEM8BA6NDV4 472 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 IFITM10A6NMD0 228 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 J3QR06 171 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF217O75362 1048 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 RSL1D1O76021 490 aaKnown RBP4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 TMF1P82094 1093 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 KRTAP1-1Q07627 177 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZRSR1Q15695 479 aaKnown RBP4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 STXBP5Q5T5C0 1151 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 GALNT5Q7Z7M9 940 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 ABHD8Q96I13 439 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 CEP295NLQ96MC4 621 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 NUDT16L1Q9BRJ7 211 aaKnown RBP4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 HGH1Q9BTY7 390 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 TEX12Q9BXU0 123 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 RTN4RQ9BZR6 473 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 SEMA6AQ9H2E6 1030 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 TAS2R14Q9NYV8 317 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 TAAR2Q9P1P5 351 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 RCC2Q9P258 522 aaKnown RBP4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 SEC63Q9UGP8 760 aaKnown RBP4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 PRAG1Q86YV5 1406 aa4.69□□□□□ -1.66
HMGB1P38-201ENST00000490557 A0A1W2PP11 408 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 FGF17O60258 216 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 VPREB1P12018 145 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 MMP9P14780 707 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 PORP16435 677 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 EIF2DP41214 584 aaKnown RBP4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 NRIP1P48552 1158 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 MMP14P50281 582 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 DLX5P56178 289 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 GAGE5Q13069 117 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 GAGE6Q13070 117 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 DLG2Q15700 870 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 NTRK2Q16620 822 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 ZNF852Q6ZMS4 543 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 LONP2Q86WA8 852 aa4.68□□□□□ -1.66
HMGB1P38-201ENST00000490557 KBTBD3Q8NAB2 608 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms