RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 SMOXQ9NWM0 555 aa13.4□□□□□ -0.26
SFXN4-208ENST00000490417 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
SFXN4-208ENST00000490417 PLEKHM1Q9Y4G2 1056 aa13.4□□□□□ -0.26
SFXN4-208ENST00000490417 DMXL2Q8TDJ6 3036 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 MYLKQ15746 1914 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 PDZK1P1A8MUH7 402 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 AP3B1O00203 1094 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 PRAMEF1O95521 474 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 VIPP01282 170 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 IFNB1P01574 187 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ITGALP20701 1170 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 CSTF2P33240 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ZFP36L1Q07352 338 aaKnown RBP13.39□□□□□ -0.27
SFXN4-208ENST00000490417 CHRNA6Q15825 494 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ZNF449Q6P9G9 518 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 WASH2PQ6VEQ5 465 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 AMZ2Q86W34 360 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
SFXN4-208ENST00000490417 DNAAF3Q8N9W5 541 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 DDHD1Q8NEL9 900 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 OR4K2Q8NGD2 314 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 SLC37A2Q8TED4 501 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 KCNE4Q8WWG9 221 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 TTC1Q99614 292 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 FOXP3Q9BZS1 431 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 B3GNT4Q9C0J1 378 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ASB8Q9H765 288 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 VPS37BQ9H9H4 285 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 WASH6PQ9NQA3 447 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 TBC1D29Q9UFV1 150 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
SFXN4-208ENST00000490417 LOXL2Q9Y4K0 774 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ARL5AQ9Y689 179 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 SLC30A1Q9Y6M5 507 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 UNC13CQ8NB66 2214 aa13.39□□□□□ -0.27
SFXN4-208ENST00000490417 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
SFXN4-208ENST00000490417 FAM208BQ5VWN6 2430 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 TRBV23OR9-2A0A075B6M9 112 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 IGHV1OR21-1A0A087WYE8 117 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 F8W8V4 182 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 PPM1DO15297 605 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 B4GAT1O43505 415 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 MTX2O75431 263 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 SRP72O76094 671 aaKnown RBP13.38□□□□□ -0.27
SFXN4-208ENST00000490417 AP2A1O95782 977 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 XRCC1P18887 633 aaPredicted RBP13.38□□□□□ -0.27
SFXN4-208ENST00000490417 CD82P27701 267 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 UGT1A5P35504 534 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 SKIDA1Q1XH10 827 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 GPR33Q49SQ1 333 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 FAM182AQ5T1J6 154 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 AGAP9Q5VTM2 703 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 TMEM71Q6P5X7 295 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 WDR74Q6RFH5 385 aaPredicted RBP13.38□□□□□ -0.27
SFXN4-208ENST00000490417 USP53Q70EK8 1073 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 SNX20Q7Z614 316 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 JAMLQ86YT9 394 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 PLXDC1Q8IUK5 500 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 AGBL5Q8NDL9 886 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 CXorf40BQ96DE9 158 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 RTP4Q96DX8 246 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 APOL2Q9BQE5 337 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 UCK1Q9HA47 277 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 ARFGAP3Q9NP61 516 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 POT1Q9NUX5 634 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 PAK5Q9P286 719 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 CPNE7Q9UBL6 633 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 DNAJC16Q9Y2G8 782 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 PCDHB11Q9Y5F2 797 aa13.38□□□□□ -0.27
SFXN4-208ENST00000490417 A0A0U1RQJ8 604 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 NVLO15381 856 aaKnown RBP13.37□□□□□ -0.27
SFXN4-208ENST00000490417 ZSCAN12O43309 604 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 TLX3O43711 291 aaPredicted RBP13.37□□□□□ -0.27
SFXN4-208ENST00000490417 LIASO43766 372 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 CD1CP29017 333 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 PPARGP37231 505 aaPredicted RBP13.37□□□□□ -0.27
SFXN4-208ENST00000490417 PDX1P52945 283 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 LIMK2P53671 638 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 CCDC173Q0VFZ6 552 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 CDH17Q12864 832 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 NFATC2Q13469 925 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 CCNG2Q16589 344 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 PLA2G4EQ3MJ16 856 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.37□□□□□ -0.27
SFXN4-208ENST00000490417 ZNF648Q5T619 568 aaPredicted RBP13.37□□□□□ -0.27
SFXN4-208ENST00000490417 GPRC6AQ5T6X5 926 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 KLHL35Q6PF15 583 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 TMEM220Q6QAJ8 160 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 C19orf48Q6RUI8 117 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 ABRAXAS1Q6UWZ7 409 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 PPP1R21Q6ZMI0 780 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 NLRP9Q7RTR0 991 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 GSTA5Q7RTV2 222 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 B3GNT8Q7Z7M8 397 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 CLEC14AQ86T13 490 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 PATE1Q8WXA2 126 aa13.37□□□□□ -0.27
SFXN4-208ENST00000490417 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms