RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 USP53Q70EK8 1073 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 KLHDC8BQ8IXV7 354 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 ZNF843Q8N446 348 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 TAB3Q8N5C8 712 aaPredicted RBP13.3□□□□□ -0.28
LMO4-203ENST00000489303 C1orf54Q8WWF1 131 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 RTP4Q96DX8 246 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 CCDC97Q96F63 343 aaPredicted RBP13.3□□□□□ -0.28
LMO4-203ENST00000489303 DCUN1D1Q96GG9 259 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 ZNF514Q96K75 400 aaPredicted RBP13.3□□□□□ -0.28
LMO4-203ENST00000489303 SLC46A1Q96NT5 459 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 RDH14Q9HBH5 336 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 PRDM8Q9NQV8 689 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 FKBPLQ9UIM3 349 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 TMPRSS11EQ9UL52 423 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 ZKSCAN5Q9Y2L8 839 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 LOXL2Q9Y4K0 774 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 DNMT3AQ9Y6K1 912 aaPredicted RBP13.3□□□□□ -0.28
LMO4-203ENST00000489303 SLC30A1Q9Y6M5 507 aa13.3□□□□□ -0.28
LMO4-203ENST00000489303 IGHV1OR21-1A0A087WYE8 117 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 CFAP99D6REC4 459 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 KLK10O43240 276 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 DUX1O43812 170 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 EML2O95834 649 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 VIPP01282 170 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 CD1CP29017 333 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 HALP42357 657 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 TMPRSS15P98073 1019 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 ZFP36L1Q07352 338 aaKnown RBP13.29□□□□□ -0.28
LMO4-203ENST00000489303 NFATC2Q13469 925 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 SQSTM1Q13501 440 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 TRA2AQ13595 282 aaKnown RBP eCLIP13.29□□□□□ -0.28
LMO4-203ENST00000489303 LAMB3Q13751 1172 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 SEPT6Q14141 434 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 PTPRCAPQ14761 206 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 OASLQ15646 514 aaKnown RBP13.29□□□□□ -0.28
LMO4-203ENST00000489303 SEPT7Q16181 437 aaKnown RBP13.29□□□□□ -0.28
LMO4-203ENST00000489303 CCNG2Q16589 344 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.29□□□□□ -0.28
LMO4-203ENST00000489303 DENND5AQ6IQ26 1287 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 TMEM220Q6QAJ8 160 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 PPP1R21Q6ZMI0 780 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 GSTA5Q7RTV2 222 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 AMZ2Q86W34 360 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 DNAAF3Q8N9W5 541 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 HEXDCQ8WVB3 486 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 EPB41L1Q9H4G0 881 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 PAK5Q9P286 719 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 CPNE7Q9UBL6 633 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 SLC23A2Q9UGH3 650 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 KCTD3Q9Y597 815 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 CFAP46Q8IYW2 2715 aa13.29□□□□□ -0.28
LMO4-203ENST00000489303 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 A6NCN8 305 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 OR2AG2A6NM03 316 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 HGSO14964 777 aaPredicted RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 ZSCAN12O43309 604 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 CEP104O60308 925 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 POP7O75817 140 aaKnown RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 FGGP02679 453 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 TPH1P17752 444 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 XRCC1P18887 633 aaPredicted RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 MSNP26038 577 aaKnown RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 MAPK9P45984 424 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 ZNF140P52738 457 aaPredicted RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 EPHA4P54764 986 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 C19orf57Q0VDD7 668 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 CDH17Q12864 832 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 SRSF6Q13247 344 aaKnown RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 POU6F1Q14863 301 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 GPR33Q49SQ1 333 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 KHDC1Q4VXA5 237 aaKnown RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 BROXQ5VW32 411 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 NKAIN2Q5VXU1 208 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 WASH2PQ6VEQ5 465 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 SNX20Q7Z614 316 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 JAMLQ86YT9 394 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 ZNF547Q8IVP9 402 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 SLITRK4Q8IW52 837 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 RASGEF1AQ8N9B8 481 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 OR4D9Q8NGE8 314 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 OR13C4Q8NGS5 318 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 KCNE4Q8WWG9 221 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 CXorf40BQ96DE9 158 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 NUDT22Q9BRQ3 303 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 TLR10Q9BXR5 811 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 SEMA6CQ9H3T2 930 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 ETNK1Q9HBU6 452 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 WASH6PQ9NQA3 447 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 PISDQ9UG56 409 aa13.28□□□□□ -0.28
LMO4-203ENST00000489303 DRG1Q9Y295 367 aaKnown RBP13.28□□□□□ -0.28
LMO4-203ENST00000489303 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 PYCARD-AS1I3L0S3 204 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 GAPDHSO14556 408 aaPredicted RBP13.27□□□□□ -0.29
LMO4-203ENST00000489303 GPR39O43194 453 aa13.27□□□□□ -0.29
LMO4-203ENST00000489303 LDB2O43679 373 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms