RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FADS2P1A8MWK0 482 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 DPP6P42658 865 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 TMPRSS15P98073 1019 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 SNCBQ16143 134 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 TPRG1LQ5T0D9 272 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 MROH9Q5TGP6 573 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 RAET1GQ6H3X3 334 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 NLRP8Q86W28 1048 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 SLC22A18ASQ8N1D0 253 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 MFSD2AQ8NA29 543 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 PPHLN1Q8NEY8 458 aaKnown RBP19.16■□□□□ 0.66
CCM2-216ENST00000488727 C7orf26Q96N11 449 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 CDH19Q9H159 772 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 PCMTD2Q9NV79 361 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 NLE1Q9NVX2 485 aaPredicted RBP19.16■□□□□ 0.66
CCM2-216ENST00000488727 GMEB2Q9UKD1 530 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 PCDH15Q96QU1 1955 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 PLXNB3Q9ULL4 1909 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 KNL1Q8NG31 2342 aa19.16■□□□□ 0.66
CCM2-216ENST00000488727 TMEM131Q92545 1883 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 PSMA3P25788 255 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 TRIM23P36406 574 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 SPAM1P38567 509 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 ARSDP51689 593 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 KCNJ2P63252 427 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 DUOXA1Q1HG43 343 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 TSTD2Q5T7W7 516 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 ATG16L1Q676U5 607 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 Q6ZSR6 202 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 PTAR1Q7Z6K3 402 aaPredicted RBP19.15■□□□□ 0.66
CCM2-216ENST00000488727 UNC5BQ8IZJ1 945 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 OR13J1Q8NGT2 312 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 STYXQ8WUJ0 223 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 CERS2Q96G23 380 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 C19orf43Q9BQ61 176 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 KIFC1Q9BW19 673 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 LRMDAQ9H2I8 198 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 GPR27Q9NS67 375 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 RAD18Q9NS91 495 aa19.15■□□□□ 0.66
CCM2-216ENST00000488727 PRR5-ARHGAP8B1AHC4 643 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 VILLO15195 856 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 GPR39O43194 453 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 USP1O94782 785 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 THEGLP0DJG4 465 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 NEFHP12036 1026 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 GPR1P46091 355 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 XIAPP98170 497 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 BNC1Q01954 994 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 TRIM61Q5EBN2 209 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 TCEAL6Q6IPX3 200 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 FAM151BQ6UXP7 276 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 TMEM135Q86UB9 458 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 IQCHQ86VS3 1027 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 ARMC2Q8NEN0 867 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 RFWD2Q8NHY2 731 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 INPP5DQ92835 1189 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 TCEAL3Q969E4 200 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 ISL2Q96A47 359 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 FUBP1Q96AE4 644 aaKnown RBP19.14■□□□□ 0.66
CCM2-216ENST00000488727 LGR4Q9BXB1 951 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 SPATA16Q9BXB7 569 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 SUDS3Q9H7L9 328 aaPredicted RBP19.14■□□□□ 0.66
CCM2-216ENST00000488727 CAPN10Q9HC96 672 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 FSCN3Q9NQT6 498 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 SAR1AQ9NR31 198 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 SOX13Q9UN79 622 aa19.14■□□□□ 0.66
CCM2-216ENST00000488727 MTO1Q9Y2Z2 717 aaKnown RBP19.14■□□□□ 0.66
CCM2-216ENST00000488727 GLYATL1P3A0A0U1RQE8 302 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 A0A1B0GVT2 93 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 HNRNPCL1O60812 293 aaKnown RBP19.14■□□□□ 0.65
CCM2-216ENST00000488727 DNAJC6O75061 913 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 GLRA3O75311 464 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 CFIP05156 583 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 BPGMP07738 259 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 NMBRP28336 390 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 CA5AP35218 305 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 GP5P40197 560 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 HADHAP40939 763 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 ACVR1Q04771 509 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 PEX6Q13608 980 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 GRTP1Q5TC63 336 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 ZDHHC20Q5W0Z9 365 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 SLC23A3Q6PIS1 610 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 HEATR4Q86WZ0 1026 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 TRAM1L1Q8N609 369 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 CEP76Q8TAP6 659 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 PTCD2Q8WV60 388 aaKnown RBP19.14■□□□□ 0.65
CCM2-216ENST00000488727 KLHDC7BQ96G42 594 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 CDKN2AIPNLQ96HQ2 116 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 TBATAQ96M53 351 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 CPNE1Q99829 537 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 ZSCAN5AQ9BUG6 496 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 APOOQ9BUR5 198 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 TEX101Q9BY14 249 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 SLC13A1Q9BZW2 595 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 WDR26Q9H7D7 661 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 TREX1Q9NSU2 369 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 NCDNQ9UBB6 729 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 RIMKLBQ9ULI2 386 aa19.14■□□□□ 0.65
CCM2-216ENST00000488727 RPS6KL1Q9Y6S9 549 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms