RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ZNF678Q5SXM1 525 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 ZDHHC20Q5W0Z9 365 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 UGT3A1Q6NUS8 523 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 EPGNQ6UW88 154 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 MACC1Q6ZN28 852 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 TMIEQ8NEW7 156 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 ARRDC3Q96B67 414 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 L3HYPDHQ96EM0 354 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 SPATA16Q9BXB7 569 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 FAM83DQ9H4H8 585 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 GSTO2Q9H4Y5 243 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 TNFRSF12AQ9NP84 129 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 ZDHHC3Q9NYG2 299 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 THAP10Q9P2Z0 257 aaPredicted RBP19.98■□□□□ 0.79
NECAB3-213ENST00000488489 MTCH2Q9Y6C9 303 aa19.98■□□□□ 0.79
NECAB3-213ENST00000488489 LRRC14BA6NHZ5 514 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 TMEM233B4DJY2 109 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 PLK4O00444 970 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 SMIM24O75264 130 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 ECI2O75521 394 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 SIX3O95343 332 aaPredicted RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 TRIM16O95361 564 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 PTDSS1P48651 473 aaKnown RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 ITPRIPL2Q3MIP1 535 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 SLC9B1Q4ZJI4 515 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 EGFLAMQ63HQ2 1017 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 PTGR2Q8N8N7 351 aaPredicted RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 OR8D1Q8WZ84 308 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 NSL1Q96IY1 281 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 COPS8Q99627 209 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 CACNA2D2Q9NY47 1150 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 RNF112Q9ULX5 631 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 IGLV3-16A0A075B6K0 115 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 H0Y3Z8 333 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 GRID2O43424 1007 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 JUNP05412 331 aaKnown RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 EIF2DP41214 584 aaKnown RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 NSG1P42857 185 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 HERVK_113P63132 956 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 KRT72Q14CN4 511 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 UNC50Q53HI1 259 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 CAPRIN2Q6IMN6 1127 aaKnown RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 LIPIQ6XZB0 460 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 FRMD7Q6ZUT3 714 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 TECPR1Q7Z6L1 1165 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 SPDL1Q96EA4 605 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 ERVK-6Q9BXR3 956 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 STN1Q9H668 368 aaKnown RBP19.97■□□□□ 0.79
NECAB3-213ENST00000488489 LMCD1Q9NZU5 365 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 ATG2BQ96BY7 2078 aa19.97■□□□□ 0.79
NECAB3-213ENST00000488489 TRIOBPQ9H2D6 2365 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 UBFD1O14562 309 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 ACADSP16219 412 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 TSPAN8P19075 237 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 ITGB7P26010 798 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 SERPINB5P36952 375 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 GRIA2P42262 883 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 ADGRE1Q14246 886 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 FBXO48Q5FWF7 155 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 GPRC6AQ5T6X5 926 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 FAM91A1Q658Y4 838 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 UCMAQ8WVF2 138 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 PRO3102Q9H379 93 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 TSR3Q9UJK0 312 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 PLXNA2O75051 1894 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 A6NHS1 94 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 HDAC3O15379 428 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 GSC2O15499 205 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 SKAP2O75563 359 aaPredicted RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 SUPT7LO94864 414 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 MTHFRP42898 656 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 HK3P52790 923 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 ALDH18A1P54886 795 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 DCDC1P59894 354 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 HENMT1Q5T8I9 393 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 FAM219BQ5XKK7 198 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 ERAP2Q6P179 960 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 SUSD6Q92537 303 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 PDLIM5Q96HC4 596 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 WRAP53Q9BUR4 548 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 RIOK2Q9BVS4 552 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 TTYH1Q9H313 450 aaPredicted RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 PRSS16Q9NQE7 514 aa19.96■□□□□ 0.79
NECAB3-213ENST00000488489 APOBEC2Q9Y235 224 aaKnown RBP19.96■□□□□ 0.79
NECAB3-213ENST00000488489 LRRK1Q38SD2 2015 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 SUPT3HB4E1H0 165 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 MTX2O75431 263 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 SUPT3HO75486 399 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 EPHX1P07099 455 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 SERPINA6P08185 405 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 ELFN1P0C7U0 828 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 GFAPP14136 432 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 NFKBIAP25963 317 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 GCKP35557 465 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 CDH13P55290 713 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 SH2D4BQ5SQS7 431 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 TREML1Q86YW5 311 aa19.95■□□□□ 0.78
NECAB3-213ENST00000488489 MMAAQ8IVH4 418 aaKnown RBP19.95■□□□□ 0.78
NECAB3-213ENST00000488489 SMRP1Q8NCR6 262 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms