RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 RACGAP1Q9H0H5 632 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 UNC93B1Q9H1C4 597 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TDRD3Q9H7E2 651 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 AGPAT3Q9NRZ7 376 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ANAPC7Q9UJX3 599 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TRAPPC4Q9Y296 219 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MPTX1A8MV57 137 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PSMD9O00233 223 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 RTCAO00442 366 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 GNB5O14775 395 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PPM1DO15297 605 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TGFB1I1O43294 461 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 SELENOFO60613 162 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 FBP1P09467 338 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 SMIM6P0DI80 62 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 RAP1GAPP47736 663 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 KCNJ5P48544 419 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MASP1P48740 699 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 IDH3AP50213 366 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MFAP3P55082 362 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 UBE2IP63279 158 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 CLCA4Q14CN2 919 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TARBP2Q15633 366 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 AP5B1Q2VPB7 878 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ZNF528Q3MIS6 628 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 KRBOX4Q5JUW0 171 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MOXD1Q6UVY6 613 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TLK2Q86UE8 772 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 FAM35AQ86V20 835 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 SLC37A3Q8NCC5 494 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 OR5T2Q8NGG2 359 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 HEXDCQ8WVB3 486 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 FAM111AQ96PZ2 611 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 AGO3Q9H9G7 860 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 EXD2Q9NVH0 621 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ING3Q9NXR8 418 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MEIOCA2RUB1 952 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 E7ENX8 843 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TBX1O43435 398 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TLL1O43897 1013 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PPP1R11O60927 126 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 FTH1P02794 183 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 SPATA31C1P0DKV0 1188 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PRKAR2AP13861 404 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 CRHBPP24387 322 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 FNTBP49356 437 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 VAMP7P51809 220 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ZNF45Q02386 682 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ETFDHQ16134 617 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 DUSP6Q16828 381 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 AOC3Q16853 763 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MICAQ29983 383 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CRTC1Q6UUV9 634 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TRILQ7L0X0 811 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ENOSF1Q7L5Y1 443 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 COMMD7Q86VX2 200 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 NUDCD3Q8IVD9 361 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PGAM4Q8N0Y7 254 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ETNPPLQ8TBG4 499 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 SETD6Q8TBK2 473 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 PROX1Q92786 737 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TRMT61AQ96FX7 289 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 FBXL20Q96IG2 436 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ACO2Q99798 780 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 IKZF4Q9H2S9 585 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TTYH1Q9H313 450 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 OSGEPL1Q9H4B0 414 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 GKN1Q9NS71 199 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CD274Q9NZQ7 290 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 EVLQ9UI08 416 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 GLI3P10071 1580 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 SLC22A23A1A5C7 686 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 FAM170BA6NMN3 283 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ZNF729A6NN14 1252 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 DDX39AO00148 427 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 ONECUT3O60422 494 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 DHFRP00374 187 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 HLA-DMAP28067 261 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 RPL35P42766 123 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 HK3P52790 923 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CDH8P55286 799 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 FRG1Q14331 258 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 PTPRRQ15256 657 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 LRRC26Q2I0M4 334 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 EIF2S3LQ2VIR3 472 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 BROXQ5VW32 411 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TMEM236Q5W0B7 351 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 ZNF720Q7Z2F6 126 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 TMIEQ8NEW7 156 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ZNF461Q8TAF7 563 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 RIT1Q92963 219 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 RBPMSQ93062 196 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 PPWD1Q96BP3 646 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 GMCL1Q96IK5 515 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms