RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 DEFB133Q30KQ1 61 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 RNF187Q5TA31 235 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 STEAP4Q687X5 459 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SLC30A9Q6PML9 568 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 TMEM220Q6QAJ8 160 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 PACS1Q6VY07 963 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 GKN2Q86XP6 184 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 CILP2Q8IUL8 1156 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 DENND6AQ8IWF6 608 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 BEND7Q8N7W2 519 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 CCL4L1Q8NHW4 92 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SETD7Q8WTS6 366 aaKnown RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SCARF2Q96GP6 870 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ZNF514Q96K75 400 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 GSDMCQ9BYG8 508 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 CLPBQ9H078 707 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 VPS37BQ9H9H4 285 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 PLAC1Q9HBJ0 212 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 TRNAU1APQ9NX07 287 aaKnown RBP12.58□□□□□ -0.4
PRDM2-208ENST00000487453 ZFATQ9P243 1243 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 DNAJC16Q9Y2G8 782 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 PLEKHM1Q9Y4G2 1056 aa12.58□□□□□ -0.4
PRDM2-208ENST00000487453 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 B4DGG1 531 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 QSOX1O00391 747 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 OR56A5P0C7T3 313 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 VCLP18206 1134 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 PI4KAP42356 2102 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 GRK6P43250 576 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 PRLHRP49683 370 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 CTBSQ01459 385 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 MGAT5Q09328 741 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 CBLBQ13191 982 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 SLC14A1Q13336 389 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 CTBP1Q13363 440 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 BCL7AQ4VC05 210 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
PRDM2-208ENST00000487453 ZNF547Q8IVP9 402 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 NAXDQ8IW45 347 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 SLC25A45Q8N413 288 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 EID2Q8N6I1 236 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 GPR150Q8NGU9 434 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 NETO1Q8TDF5 533 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 SCG3Q8WXD2 468 aaKnown RBP12.57□□□□□ -0.4
PRDM2-208ENST00000487453 TIMM29Q9BSF4 260 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 RRAGDQ9NQL2 400 aaPredicted RBP12.57□□□□□ -0.4
PRDM2-208ENST00000487453 KLC4Q9NSK0 619 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 INTS10Q9NVR2 710 aaKnown RBP12.57□□□□□ -0.4
PRDM2-208ENST00000487453 SLC17A6Q9P2U8 582 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
PRDM2-208ENST00000487453 GPR34Q9UPC5 381 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
PRDM2-208ENST00000487453 LMO7DNF2Z398 122 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 F8W8V4 182 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 PRMT5O14744 637 aaPredicted RBP12.56□□□□□ -0.4
PRDM2-208ENST00000487453 YY2O15391 372 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 SNX2O60749 519 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 POP7O75817 140 aaKnown RBP12.56□□□□□ -0.4
PRDM2-208ENST00000487453 AP2A2O94973 939 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 FTH1P02794 183 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 GSTA2P09210 222 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 CD59P13987 128 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 STX2P32856 288 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 LIMK1P53667 647 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 ARHGAP8P85298 464 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 MPP1Q00013 466 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 SEPT7Q16181 437 aaKnown RBP12.56□□□□□ -0.4
PRDM2-208ENST00000487453 ERCC6LQ2NKX8 1250 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 SYTL3Q4VX76 610 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 C3orf62Q6ZUJ4 267 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 KANSL1Q7Z3B3 1105 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 AMZ2Q86W34 360 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 NRROSQ86YC3 692 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 FAM46DQ8NEK8 389 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 CDKL2Q92772 493 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 TCF12Q99081 682 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 TSSK1BQ9BXA7 367 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 CDC42EP4Q9H3Q1 356 aaKnown RBP12.56□□□□□ -0.4
PRDM2-208ENST00000487453 DPEP2Q9H4A9 486 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 NLGN3Q9NZ94 848 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 NINJ2Q9NZG7 142 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 SIRPGQ9P1W8 387 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 SLC23A2Q9UGH3 650 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 GNPTGQ9UJJ9 305 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 FBXO5Q9UKT4 447 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 BTBD3Q9Y2F9 522 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 CRYL1Q9Y2S2 319 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 PRSS21Q9Y6M0 314 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 CSNK1G3Q9Y6M4 447 aa12.56□□□□□ -0.4
PRDM2-208ENST00000487453 TCRBV9S1A1TA0A576 114 aa12.55□□□□□ -0.4
PRDM2-208ENST00000487453 PDZK1P1A8MUH7 402 aa12.55□□□□□ -0.4
PRDM2-208ENST00000487453 SGTAO43765 313 aa12.55□□□□□ -0.4
PRDM2-208ENST00000487453 SH3BP5O60239 455 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms