RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CTSL3PQ5NE16 218 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 CERS6Q6ZMG9 384 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 CAMK1DQ8IU85 385 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 MYO1HQ8N1T3 1032 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 C19orf43Q9BQ61 176 aa25.83■■□□□ 1.72
HLA-C-208ENST00000487245 SEMA4BQ9NPR2 832 aaPredicted RBP25.83■■□□□ 1.72
HLA-C-208ENST00000487245 NPEPPSL1A6NEC2 478 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 GRXCR2A6NFK2 248 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 PDLIM1O00151 329 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 CHEK2O96017 543 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 PSMA4P25789 261 aaKnown RBP25.82■■□□□ 1.72
HLA-C-208ENST00000487245 ZFP36L2P47974 494 aaKnown RBP25.82■■□□□ 1.72
HLA-C-208ENST00000487245 CNKSR3Q6P9H4 555 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 GPSM1Q86YR5 675 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 TCEAL8Q8IYN2 117 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 ADGRG5Q8IZF4 528 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 SLC39A11Q8N1S5 342 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 SMPD4Q9NXE4 827 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 IL17CQ9P0M4 197 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 ZNF711Q9Y462 761 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 PCDHB1Q9Y5F3 818 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 CEPT1Q9Y6K0 416 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 SLC30A1Q9Y6M5 507 aa25.82■■□□□ 1.72
HLA-C-208ENST00000487245 A0A1B0GTL3 188 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 CARNS1A5YM72 827 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 E5RI56 91 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 SOCS2O14508 198 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 SNX2O60749 519 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 TSPAN12O95859 305 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ASLP04424 464 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 FCGR1AP12314 374 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 EEFSECP57772 596 aaKnown RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ARMC12Q5T9G4 340 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 TAS2R42Q7RTR8 314 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 SYVN1Q86TM6 617 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 DCAF4L2Q8NA75 395 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 OR56A4Q8NGH8 313 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 CD200R1Q8TD46 325 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 PDLIM5Q96HC4 596 aaKnown RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 SMIM14Q96QK8 99 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 IL1RL2Q9HB29 575 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 BPIFA1Q9NP55 256 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 DNMT3BQ9UBC3 853 aaKnown RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 SLC8A2Q9UPR5 921 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ANAPC1Q9H1A4 1944 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 TRIM64CA6NLI5 447 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 GFRA2O00451 464 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ARPC2O15144 300 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 NIPSNAP2O75323 286 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 NPPAP01160 153 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 CKMT2P17540 419 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 CHRM3P20309 590 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 FASP25445 335 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 KCNK10P57789 538 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 KRT80Q6KB66 452 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ISLR2Q6UXK2 745 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ITIH5Q86UX2 942 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 SIDT2Q8NBJ9 832 aaKnown RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 PAPD5Q8NDF8 572 aaKnown RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 LINGO1Q96FE5 620 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 RMND5BQ96G75 393 aaPredicted RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 C9orf16Q9BUW7 83 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 GPR63Q9BZJ6 419 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 TUBA8Q9NY65 449 aaPredicted RBP25.81■■□□□ 1.72
HLA-C-208ENST00000487245 ZIM2Q9NZV7 527 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 GALPQ9UBC7 116 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 VPS51Q9UID3 782 aa25.81■■□□□ 1.72
HLA-C-208ENST00000487245 GIPC1O14908 333 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 OR1I1O60431 355 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 DIO3P55073 304 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 ATP6AP1Q15904 470 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 KCTD21Q4G0X4 260 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 SPRED1Q7Z699 444 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 TMEM150AQ86TG1 271 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 SPPL2CQ8IUH8 684 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 TRPV3Q8NET8 790 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 CENPNQ96H22 339 aaPredicted RBP25.8■■□□□ 1.72
HLA-C-208ENST00000487245 HIC2Q96JB3 615 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 SLC30A3Q99726 388 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 P2RY12Q9H244 342 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 LEF1Q9UJU2 399 aaPredicted RBP25.8■■□□□ 1.72
HLA-C-208ENST00000487245 PCDHB9Q9Y5E1 797 aa25.8■■□□□ 1.72
HLA-C-208ENST00000487245 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 ASPDHA6ND91 283 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 BMP10O95393 424 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 URODP06132 367 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 UMPSP11172 480 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 HMGCLP35914 325 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 CDH18Q13634 790 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 CAPRIN1Q14444 709 aaKnown RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 FXNQ16595 210 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 Q6ZNB5 142 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 FAM217AQ8IXS0 508 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 ZNF296Q8WUU4 475 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 EEF1AKMT1Q8WVE0 214 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 ALG14Q96F25 216 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 HGH1Q9BTY7 390 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 CLK4Q9HAZ1 481 aaKnown RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 PAK6Q9NQU5 681 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 RIC8BQ9NVN3 520 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms