RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 AMZ2Q86W34 360 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 SLITRK4Q8IW52 837 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 REXO1L1PQ8IX06 675 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 OR10G6Q8NH81 332 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 SH3KBP1Q96B97 665 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 ULK4Q96C45 1275 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 DCUN1D1Q96GG9 259 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 THSD1Q9NS62 852 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 LOXL2Q9Y4K0 774 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 PCDHGA8Q9Y5G5 932 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 PKD1L2Q7Z442 2459 aa22.03■■□□□ 1.12
CDHR3-212ENST00000487084 PLD2O14939 933 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 POP7O75817 140 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 DXOO77932 396 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 TNFSF15O95150 251 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 APRTP07741 180 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 RPL22P35268 128 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 KCNJ1P48048 391 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 ZFP36L1Q07352 338 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 EIF3IQ13347 325 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 SEMA5AQ13591 1074 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 LRRC69Q6ZNQ3 347 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 MICALCLQ6ZW33 695 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 SNX20Q7Z614 316 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 BEND7Q8N7W2 519 aaPredicted RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 AVL9Q8NBF6 648 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 SNIP1Q8TAD8 396 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 STYXQ8WUJ0 223 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 SGF29Q96ES7 293 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 NAF1Q96HR8 494 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 SLC46A1Q96NT5 459 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 ASCL3Q9NQ33 180 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 NLE1Q9NVX2 485 aaPredicted RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 PISDQ9UG56 409 aa22.02■■□□□ 1.12
CDHR3-212ENST00000487084 DRG1Q9Y295 367 aaKnown RBP22.02■■□□□ 1.12
CDHR3-212ENST00000487084 RRP8O43159 456 aaKnown RBP22.01■■□□□ 1.11
CDHR3-212ENST00000487084 DUX1O43812 170 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 VIPP01282 170 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 JMJD7P0C870 316 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 RALBP11234 206 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 MPSTP25325 297 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 CSF2RBP32927 897 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 GRIA1P42261 906 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 PCBP4P57723 403 aaKnown RBP22.01■■□□□ 1.11
CDHR3-212ENST00000487084 GPLD1P80108 840 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 BASP1P80723 227 aaKnown RBP22.01■■□□□ 1.11
CDHR3-212ENST00000487084 CCDC173Q0VFZ6 552 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 CLPPQ16740 277 aaPredicted RBP22.01■■□□□ 1.11
CDHR3-212ENST00000487084 KCTD19Q17RG1 926 aaPredicted RBP22.01■■□□□ 1.11
CDHR3-212ENST00000487084 TAS2R42Q7RTR8 314 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 NXPE1Q8N323 547 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 SLC35F6Q8N357 371 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 RCBTB1Q8NDN9 531 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 PRR11Q96HE9 360 aaPredicted RBP22.01■■□□□ 1.11
CDHR3-212ENST00000487084 CCDC74BQ96LY2 380 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 C19orf43Q9BQ61 176 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 HOMER3Q9NSC5 361 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 FAM8A1Q9UBU6 413 aa22.01■■□□□ 1.11
CDHR3-212ENST00000487084 KIF26BQ2KJY2 2108 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 OR52A4PA6NMU1 304 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 SUN1O94901 812 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 HOXB3P14651 431 aaPredicted RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 EIF2S3P41091 472 aaKnown RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 ERVPABLB-1P60509 514 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 UBE2IP63279 158 aaKnown RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 JAMLQ86YT9 394 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 CXorf40BQ96DE9 158 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 CCDC97Q96F63 343 aaPredicted RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 MS4A14Q96JA4 679 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 ZNF514Q96K75 400 aaPredicted RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 PBKQ96KB5 322 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 COPS8Q99627 209 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 CMKLR1Q99788 373 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 LDHAL6BQ9BYZ2 381 aaPredicted RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 AKAP7Q9P0M2 348 aaPredicted RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 TMEM9Q9P0T7 183 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 CELSR3Q9NYQ7 3312 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 ZZEF1O43149 2961 aa22■■□□□ 1.11
CDHR3-212ENST00000487084 ZNF106Q9H2Y7 1883 aaKnown RBP22■■□□□ 1.11
CDHR3-212ENST00000487084 A0A087WV48 116 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 IGHV5-10-1A0A0J9YXX1 117 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 PRR19A6NJB7 356 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 CFAP99D6REC4 459 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 KIF5CO60282 957 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 KCNJ13O60928 360 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 PRSS56P0CW18 603 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 BRAFP15056 766 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 MSNP26038 577 aaKnown RBP21.99■■□□□ 1.11
CDHR3-212ENST00000487084 SLC19A1P41440 591 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 HALP42357 657 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 ABCG1P45844 678 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 CDKN1CP49918 316 aaPredicted RBP21.99■■□□□ 1.11
CDHR3-212ENST00000487084 NFE2L1Q14494 772 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 SKIDA1Q1XH10 827 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 IGF2-ASQ6U949 168 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 ZNF574Q6ZN55 896 aaPredicted RBP21.99■■□□□ 1.11
CDHR3-212ENST00000487084 FAM83HQ6ZRV2 1179 aaPredicted RBP21.99■■□□□ 1.11
CDHR3-212ENST00000487084 PRELID2Q8N945 189 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 OR4D9Q8NGE8 314 aa21.99■■□□□ 1.11
CDHR3-212ENST00000487084 NCSTNQ92542 709 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms