RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ANKRD20A8PQ5CZ79 823 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 DNTTIP2Q5QJE6 756 aaKnown RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 CRTC3Q6UUV7 619 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 IGFL3Q6UXB1 125 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 RFLNAQ6ZTI6 216 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 LRRTM4Q86VH4 590 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 PHF13Q86YI8 300 aaPredicted RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 DSELQ8IZU8 1212 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 CARFQ8N187 725 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 PGBD5Q8N414 524 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 D2HGDHQ8N465 521 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 PIH1D2Q8WWB5 315 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 BARD1Q99728 777 aaKnown RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 C17orf62Q9BQA9 187 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 DPH2Q9BQC3 489 aaPredicted RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 TUBGCP2Q9BSJ2 902 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 DHRS4Q9BTZ2 278 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 SNRNP25Q9BV90 132 aaKnown RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 OR2AG1Q9H205 316 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 FAM83DQ9H4H8 585 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 AKIRIN1Q9H9L7 192 aaPredicted RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 SLC40A1Q9NP59 571 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 CHST11Q9NPF2 352 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 KCND1Q9NSA2 647 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 SEPT11Q9NVA2 429 aaKnown RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 GPATCH2LQ9NWQ4 482 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 SOHLH2Q9NX45 425 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 SCHIP1Q9P0W5 487 aaPredicted RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 SEMA5BQ9P283 1151 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 ZNF624Q9P2J8 865 aaPredicted RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 ATXN10Q9UBB4 475 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 SUCOQ9UBS9 1254 aaKnown RBP7.5□□□□□ -1.21
PDPN-205ENST00000487038 DNAJC16Q9Y2G8 782 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 SIK3Q9Y2K2 1263 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 PCDHGA10Q9Y5H3 936 aa7.5□□□□□ -1.21
PDPN-205ENST00000487038 CCDC88CQ9P219 2028 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 CNTRLQ7Z7A1 2325 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 OR52A4PA6NMU1 304 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 MEN1O00255 615 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PEX12O00623 359 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 VEGFDO43915 354 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PRPSAP2O60256 369 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 FZD6O60353 706 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 RNF8O76064 485 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 SLC25A14O95258 325 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 CLDN7O95471 211 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZBTB11O95625 1053 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 PDHA1P08559 390 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 COX6B1P14854 86 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZNF7P17097 686 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZNF8P17098 575 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 FECHP22830 423 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PSMA2P25787 234 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 RPL10P27635 214 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 ARL4AP40617 200 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 SPINT3P49223 89 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 RPL26P61254 145 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 RPL7AP62424 266 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 ADCY2Q08462 1091 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ART3Q13508 389 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 NCF4Q15080 339 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PTPRRQ15256 657 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 CLEC16AQ2KHT3 1053 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 AGAP9Q5VTM2 703 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PDPK2PQ6A1A2 396 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PPP1R2P3Q6NXS1 205 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 TMCO3Q6UWJ1 677 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ABRAXAS1Q6UWZ7 409 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 WASH2PQ6VEQ5 465 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 Q6ZS92 163 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 MON1BQ7L1V2 547 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 FJX1Q86VR8 437 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 KCNMB4Q86W47 210 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 OOSP2Q86WS3 158 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 PSTKQ8IV42 348 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 SYTL1Q8IYJ3 562 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 GALNT16Q8N428 558 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 TTC30BQ8N4P2 665 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZBTB2Q8N680 514 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZNF501Q96CX3 271 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 HDAC11Q96DB2 347 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 LYSMD1Q96S90 227 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 KCTD15Q96SI1 283 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 MAP3K3Q99759 626 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 WDR77Q9BQA1 342 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZSCAN5AQ9BUG6 496 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 SPATA16Q9BXB7 569 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 TDRD1Q9BXT4 1180 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 SYTL2Q9HCH5 934 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 TRIM39Q9HCM9 518 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 RAD18Q9NS91 495 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 FAM207AQ9NSI2 230 aaPredicted RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 CNOT6Q9ULM6 557 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 RPL26L1Q9UNX3 145 aaKnown RBP7.49□□□□□ -1.21
PDPN-205ENST00000487038 ADGRG1Q9Y653 693 aa7.49□□□□□ -1.21
PDPN-205ENST00000487038 ZGRF1Q86YA3 2104 aa7.48□□□□□ -1.21
PDPN-205ENST00000487038 A0A0U1RQS6 177 aa7.48□□□□□ -1.21
PDPN-205ENST00000487038 H3BRJ5 948 aa7.48□□□□□ -1.21
PDPN-205ENST00000487038 E2F3O00716 465 aa7.48□□□□□ -1.21
PDPN-205ENST00000487038 CHUKO15111 745 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms