RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 EMC1Q8N766 993 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 SLC38A9Q8NBW4 561 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CLEC18CQ8NCF0 446 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 HMGCLL1Q8TB92 370 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 THAP6Q8TBB0 222 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 DUSP19Q8WTR2 217 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PHF21BQ96EK2 531 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 DGAT2Q96PD7 388 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 CSF3RQ99062 836 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 DDOQ99489 341 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 MTERF1Q99551 399 aaKnown RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 BAG1Q99933 345 aaPredicted RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 SEMA3CQ99985 751 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 SPATC1LQ9H0A9 340 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 MMP27Q9H306 513 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 RAD21L1Q9H4I0 556 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 DENND2DQ9H6A0 471 aaPredicted RBP3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 HACL1Q9UJ83 578 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PADI3Q9ULW8 664 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 KLHL20Q9Y2M5 609 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 ZNF711Q9Y462 761 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 PCDHGA5Q9Y5G8 931 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 TRPV2Q9Y5S1 764 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 NFS1Q9Y697 457 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
SNRNP27-204ENST00000487029 IGLV5-37A0A075B6J1 123 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 MAGEB17A8MXT2 336 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF217O75362 1048 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CLDN14O95500 239 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 VPREB1P12018 145 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 HRH2P25021 359 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CAPZA2P47755 286 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 DSCR9P59020 149 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 UBXN2AP68543 259 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 SIRPAP78324 504 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 PPP2R2BQ00005 443 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 PDE1BQ01064 536 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF155Q12901 538 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 KRT33BQ14525 404 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 KYNUQ16719 465 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 MEP1AQ16819 746 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 SETMARQ53H47 684 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 KRTCAP3Q53RY4 240 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 FAM133BQ5BKY9 247 aaKnown RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 C9orf152Q5JTZ5 239 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 OTUD3Q5T2D3 398 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ERMARDQ5T6L9 678 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ZDHHC20Q5W0Z9 365 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 DHRS7BQ6IAN0 325 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 INTS8Q75QN2 995 aaKnown RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 HAUS6Q7Z4H7 955 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 LDB1Q86U70 411 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CEP97Q8IW35 865 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 PM20D2Q8IYS1 436 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 GCSAMQ8N6F7 178 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ACVR1CQ8NER5 493 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ELP5Q8TE02 316 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 UTP15Q8TED0 518 aaKnown RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 TMED6Q8WW62 240 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 LPGAT1Q92604 370 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 TANKQ92844 425 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 PGAP3Q96FM1 320 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 SCMH1Q96GD3 660 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CNDP2Q96KP4 475 aaKnown RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 C3orf30Q96M34 536 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 QRFPRQ96P65 431 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 SMC6Q96SB8 1091 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CDRT15Q96T59 188 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 GFI1Q99684 422 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 HGH1Q9BTY7 390 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CCDC106Q9BWC9 280 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 SEZ6LQ9BYH1 1024 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 KCNK15Q9H427 330 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 RABEP2Q9H5N1 569 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 CHMP1AQ9HD42 196 aaPredicted RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 TAS2R14Q9NYV8 317 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 LARSQ9P2J5 1176 aaKnown RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 WNT16Q9UBV4 365 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 AMACRQ9UHK6 382 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 TSPYL4Q9UJ04 414 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ANAPC2Q9UJX6 822 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 ICAM5Q9UMF0 924 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 WBP11Q9Y2W2 641 aaKnown RBP3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 AMDHD2Q9Y303 409 aa3.46□□□□□ -1.86
SNRNP27-204ENST00000487029 TCRBV21S2A2A0A5A6 115 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 CLGNO14967 610 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 NDUFS4O43181 175 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 KDM4BO94953 1096 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 ZNF12P17014 697 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 GJA1P17302 382 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 S1PR1P21453 382 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 KCNA5P22460 613 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 NR2F2P24468 414 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 NMBRP28336 390 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 EEF1DP29692 281 aaKnown RBP3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 MATR3P43243 847 aaKnown RBP eCLIP3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 MYBPHQ13203 477 aa3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 SNTB1Q13884 538 aaKnown RBP3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 FAM98BQ52LJ0 330 aaKnown RBP3.45□□□□□ -1.86
SNRNP27-204ENST00000487029 RHBDF2Q6PJF5 856 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms