RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ANKDD1BA6NHY2 528 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 FAM47E-STBD1D6RA91 191 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 UBXN8O00124 270 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CDK14O94921 469 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 KCNH1O95259 989 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MED26O95402 600 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 ADSLP30566 484 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CSKP41240 450 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 IL5RAQ01344 420 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 TOP3AQ13472 1001 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MS4A13Q5J8X5 152 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 GPR156Q8NFN8 814 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 OR7A2PQ8NGA2 310 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 TPD52L3Q96J77 140 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 LENG8Q96PV6 779 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 GPR62Q9BZJ7 368 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 WDR12Q9GZL7 423 aaKnown RBP10.93□□□□□ -0.66
HDAC6-228ENST00000486227 CD84Q9UIB8 345 aa10.93□□□□□ -0.66
HDAC6-228ENST00000486227 MFN2O95140 757 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 H6PDO95479 791 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 PRKCGP05129 697 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 GALTP07902 379 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 FSHRP23945 695 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 MAGEA8P43361 318 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 BNIP2Q12982 314 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 PWP1Q13610 501 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CAND1Q86VP6 1230 aaKnown RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 SERPINA9Q86WD7 417 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ZDHHC13Q8IUH4 622 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TIFAQ96CG3 184 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 C19orf60Q96EN9 201 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ACAT2Q9BWD1 397 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 DGCR6LQ9BY27 220 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF395Q9H8N7 513 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 SLC27A6Q9Y2P4 619 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TPRKBQ9Y3C4 175 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 DHRS12A0PJE2 317 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 LRRC72A6NJI9 287 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ZBTB42B2RXF5 422 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TYROBPO43914 113 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 NRP2O60462 931 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 IFNA14P01570 189 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 HAPLN1P10915 354 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 IDO1P14902 403 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ITPKAP23677 461 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 SLC10A2Q12908 348 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TRIM69Q86WT6 500 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 BEND7Q8N7W2 519 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 SETD9Q8NE22 299 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 OR14C36Q8NHC7 312 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 SH3RF2Q8TEC5 729 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 HERVK_113Q902F9 699 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 SPACA7Q96KW9 195 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 HBEGFQ99075 208 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 EBF4Q9BQW3 602 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 KCTD5Q9NXV2 234 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 KCNE2Q9Y6J6 123 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 POP4O95707 220 aaKnown RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CYBAP13498 195 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CSF2RAP15509 400 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CXCR2P25025 360 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 HNF4AP41235 474 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 PSMD8P48556 350 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CSTF3Q12996 717 aaKnown RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 LRRC73Q5JTD7 316 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 MARCH8Q5T0T0 291 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 GCNT7Q6ZNI0 430 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ADGRG6Q86SQ4 1221 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ZDHHC14Q8IZN3 488 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ZNF461Q8TAF7 563 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CAPSLQ8WWF8 208 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CIB1Q99828 191 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 UGT2B28Q9BY64 529 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 FAM83DQ9H4H8 585 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CXorf21Q9HAI6 301 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 GIN1Q9NXP7 522 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 EGFL7Q9UHF1 273 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ASF1AQ9Y294 204 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TRIM24O15164 1050 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 FGF18O76093 207 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 LRATO95237 230 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CHRNGP07510 517 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 AOC1P19801 751 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 RAVER1Q8IY67 606 aaKnown RBP10.92□□□□□ -0.66
HDAC6-228ENST00000486227 CNTD1Q8N815 330 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 PDPRQ8NCN5 879 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 ASZ1Q8WWH4 475 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 PCDH12Q9NPG4 1184 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TBCCD1Q9NVR7 557 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 NHSQ6T4R5 1651 aa10.92□□□□□ -0.66
HDAC6-228ENST00000486227 TNRC6CQ9HCJ0 1690 aaKnown RBP10.91□□□□□ -0.66
HDAC6-228ENST00000486227 A0A0J9YYE9 177 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 PNMA8CA0A1B0GUJ8 204 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 ILVBLA1L0T0 632 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 IQCF5A8MTL0 148 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 C9JVG2 144 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 GUCY1B2O75343 617 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 EPN2O95208 641 aa10.91□□□□□ -0.66
HDAC6-228ENST00000486227 ZBTB11O95625 1053 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms