RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TLE3Q04726 772 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 COL28A1Q2UY09 1125 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 P3H1Q32P28 736 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 GPR33Q49SQ1 333 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 C3orf38Q5JPI3 329 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 FAM182AQ5T1J6 154 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 MEI1Q5TIA1 1274 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 AADACL2Q6P093 401 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 DRICH1Q6PGQ1 229 aaPredicted RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 MARK2Q7KZI7 788 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 TMPRSS9Q7Z410 1059 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 GLT6D1Q7Z4J2 308 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 TRIM46Q7Z4K8 759 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 PDZD3Q86UT5 571 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 DTX1Q86Y01 620 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 ZNF547Q8IVP9 402 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 SPACA3Q8IXA5 215 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 Q8N9G6 341 aaPredicted RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 SPC24Q8NBT2 197 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 IPMKQ8NFU5 416 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 ZNF398Q8TD17 642 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 SLC37A2Q8TED4 501 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 PATE1Q8WXA2 126 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 WBP1Q96G27 269 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 LINC00615Q96LM1 132 aaPredicted RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 TTC25Q96NG3 672 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 ZCCHC2Q9C0B9 1178 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 RAB33BQ9H082 229 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 STN1Q9H668 368 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 KLC4Q9NSK0 619 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 KCNK4Q9NYG8 393 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 AKAP7Q9P0M2 348 aaPredicted RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 EPHA6Q9UF33 1036 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 SLC23A2Q9UGH3 650 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 RIMKLBQ9ULI2 386 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 DRG1Q9Y295 367 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 PCDHGA3Q9Y5H0 932 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 PCYT1BQ9Y5K3 369 aaPredicted RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 ZNF106Q9H2Y7 1883 aaKnown RBP6.9□□□□□ -1.31
VPS50-218ENST00000485994 TRBV5-4A0A0C4DH59 114 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 GLYATL1P3A0A0U1RQE8 302 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 A0A0U1RQJ8 604 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 C17orf113A0A1B0GUU1 675 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 B4E171 279 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A9O60656 530 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 EML2O95834 649 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 FTCDO95954 541 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 C9P02748 559 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 GSTM1P09488 218 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 THRAP10827 490 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 ACP5P13686 325 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 VCLP18206 1134 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A6P19224 532 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 IDSP22304 550 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A1P22309 533 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A4P22310 534 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 ITPKBP27987 946 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 PSMB4P28070 264 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SLC5A2P31639 672 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 UGT1A3P35503 534 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 FDFT1P37268 417 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 TSPAN7P41732 249 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 GSTM4Q03013 218 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 BIRC2Q13490 618 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 LAMB3Q13751 1172 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 TCEA2Q15560 299 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 OASLQ15646 514 aaKnown RBP6.89□□□□□ -1.31
VPS50-218ENST00000485994 CHRNA6Q15825 494 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 CCNG2Q16589 344 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 LONRF2Q1L5Z9 754 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 KHDC1Q4VXA5 237 aaKnown RBP6.89□□□□□ -1.31
VPS50-218ENST00000485994 TMEM164Q5U3C3 297 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 BROXQ5VW32 411 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 METRNLQ641Q3 311 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 C19orf48Q6RUI8 117 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 XKR5Q6UX68 686 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 C4orf22Q6V702 233 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 TMEM26Q6ZUK4 368 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 GPR155Q7Z3F1 870 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 LINC00523Q86TU6 105 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SLC25A41Q8N5S1 370 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 BEND7Q8N7W2 519 aaPredicted RBP6.89□□□□□ -1.31
VPS50-218ENST00000485994 AGBL5Q8NDL9 886 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 OR4K2Q8NGD2 314 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 OR10G6Q8NH81 332 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 CCDC110Q8TBZ0 833 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 BLOC1S5Q8TDH9 187 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 MAIP1Q8WWC4 291 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 KCNE4Q8WWG9 221 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 ULK4Q96C45 1275 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SGSM3Q96HU1 749 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 TAAR9Q96RI9 348 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SLC38A3Q99624 504 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 TBL1YQ9BQ87 522 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 ZPBPQ9BS86 351 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 SPRY4Q9C004 299 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 C10orf88Q9H8K7 445 aa6.89□□□□□ -1.31
VPS50-218ENST00000485994 LRRC40Q9H9A6 602 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms