RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RAB11FIP2Q7L804 512 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF438Q7Z4V0 828 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 B3GNT8Q7Z7M8 397 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 JAMLQ86YT9 394 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF547Q8IVP9 402 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 NXPE1Q8N323 547 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 RASGEF1CQ8N431 466 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 GLIS1Q8NBF1 620 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
PTCD1-205ENST00000485746 NCSTNQ92542 709 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 FGF11Q92914 225 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 OSBPL9Q96SU4 736 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 TTC1Q99614 292 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 C19orf43Q9BQ61 176 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 THSD1Q9NS62 852 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 ZDHHC3Q9NYG2 299 aa12.31□□□□□ -0.44
PTCD1-205ENST00000485746 TTC7AQ9ULT0 858 aaPredicted RBP12.31□□□□□ -0.44
PTCD1-205ENST00000485746 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 PLD2O14939 933 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 KRT14P02533 472 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 CAPNS1P04632 268 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 ATP1B2P14415 290 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 AMD1P17707 334 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 ADRA1DP25100 572 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 CCKBRP32239 447 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 GRIA1P42261 906 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 GNG11P61952 73 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 GPS1Q13098 491 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 KRT33BQ14525 404 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 GSE1Q14687 1217 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 NR1D2Q14995 579 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 CLPPQ16740 277 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 TBC1D25Q3MII6 688 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SNAP47Q5SQN1 464 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 NLRP9Q7RTR0 991 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SERPINA9Q86WD7 417 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 BEND7Q8N7W2 519 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 OR6P1Q8NGX9 317 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 LIN37Q96GY3 246 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 PDLIM2Q96JY6 352 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 ZNF578Q96N58 590 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 CMKLR1Q99788 373 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 DPYSL5Q9BPU6 564 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 NUDT22Q9BRQ3 303 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SEMA6CQ9H3T2 930 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 CASS4Q9NQ75 786 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 BFARQ9NZS9 450 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 SCHIP1Q9P0W5 487 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 ANAPC5Q9UJX4 755 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 LOXL2Q9Y4K0 774 aa12.3□□□□□ -0.44
PTCD1-205ENST00000485746 ARID1BQ8NFD5 2236 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-205ENST00000485746 MGAT4DA6NG13 374 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 MROH6A6NGR9 719 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 H7C0S8 307 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 POLBP06746 335 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 XRCC1P18887 633 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 MPSTP25325 297 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 ACRV1P26436 265 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 PPARGP37231 505 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 NPY2RP49146 381 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 CDKN1CP49918 316 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 MAPK10P53779 464 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 PRAMEP78395 509 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 CCDC173Q0VFZ6 552 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 NFE2L1Q14494 772 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 PCID2Q5JVF3 399 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 TSTD2Q5T7W7 516 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 AGAP9Q5VTM2 703 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 LYPLAL1Q5VWZ2 237 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 CCDC137Q6PK04 289 aaKnown RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 C19orf48Q6RUI8 117 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 ABRAXAS1Q6UWZ7 409 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 CFAP206Q8IYR0 622 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 GRK7Q8WTQ7 553 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 COG1Q8WTW3 980 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 NAT14Q8WUY8 206 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 HNRNPLLQ8WVV9 542 aaKnown RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 HDAC10Q969S8 669 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 TMEM159Q96B96 161 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 RANBP9Q96S59 729 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 TBC1D10AQ9BXI6 508 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 EIF2B3Q9NR50 452 aaKnown RBP12.29□□□□□ -0.44
PTCD1-205ENST00000485746 PISDQ9UG56 409 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 TCAF1Q9Y4C2 921 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 PCDHGA8Q9Y5G5 932 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 PTPRBP23467 1997 aa12.29□□□□□ -0.44
PTCD1-205ENST00000485746 CCDC162PA2VCL2 907 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms