RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 ADAM12O43184 909 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 COCHO43405 550 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MFSD11O43934 449 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ACSL4O60488 711 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TMEM127O75204 238 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ANXA9O76027 345 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 SEC24AO95486 1093 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TTC4O95801 387 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CA3P07451 260 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MYZAPP0CAP1 466 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MBL2P11226 248 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 PECAM1P16284 738 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ERCC2P18074 760 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RPL17P18621 184 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 HDCP19113 662 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CA4P22748 312 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 STX2P32856 288 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 AVPR1AP37288 418 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RPL21P46778 160 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 LMAN1P49257 510 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CARSP49589 748 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 PMS2P54278 862 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 FAM193AP78312 1265 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 IFI35P80217 286 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 GBE1Q04446 702 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 IFFO1Q0D2I5 559 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 AP1B1Q10567 949 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ZNF177Q13360 481 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 GPM6BQ13491 265 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 SEMA5AQ13591 1074 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 SLC12A1Q13621 1099 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RASA2Q15283 850 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CA9Q16790 459 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 DUSP6Q16828 381 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 PREPLQ4J6C6 727 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ATP13A4Q4VNC1 1196 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MS4A13Q5J8X5 152 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 PRAMEF14Q5SWL7 426 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ATXN7L2Q5T6C5 722 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RNASEH2BQ5TBB1 312 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 IZUMO3Q5VZ72 239 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 PLPP4Q5VZY2 271 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 AFMIDQ63HM1 303 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 HIBCHQ6NVY1 386 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 AADACL2Q6P093 401 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 C1orf228Q6PIY5 440 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TAOK1Q7L7X3 1001 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 C1QL2Q7Z5L3 287 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 NLRP14Q86W24 1093 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CHSY1Q86X52 802 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 LYSMD2Q8IV50 215 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 FAM217AQ8IXS0 508 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 KRT222Q8N1A0 295 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RIBC1Q8N443 379 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ZNF366Q8N895 744 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ATP11CQ8NB49 1132 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CCNYQ8ND76 341 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MAFAQ8NHW3 353 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 FBXO25Q8TCJ0 367 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 NDRG1Q92597 394 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MRPL38Q96DV4 380 aaKnown RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RPRD1AQ96P16 312 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TRIM51Q9BSJ1 452 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TMEM121Q9BTD3 319 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TMEM109Q9BVC6 243 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ROPN1BQ9BZX4 212 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MAGEH1Q9H213 219 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 GBA3Q9H227 469 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TASP1Q9H6P5 420 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 TLE6Q9H808 572 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 LRRC40Q9H9A6 602 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 SLC28A3Q9HAS3 691 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ROPN1Q9HAT0 212 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 CASS4Q9NQ75 786 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 MAN1C1Q9NR34 630 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 VPS45Q9NRW7 570 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ZDHHC18Q9NUE0 388 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 GPATCH2LQ9NWQ4 482 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 OBP2AQ9NY56 170 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 GDE1Q9NZC3 331 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 GRHL1Q9NZI5 618 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 SNX24Q9Y343 169 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 ZFP37Q9Y6Q3 630 aaPredicted RBP4.34□□□□□ -1.71
SPTA1-206ENST00000484520 NUMBLQ9Y6R0 609 aa4.34□□□□□ -1.71
SPTA1-206ENST00000484520 RANBP2P49792 3224 aaKnown RBP4.34□□□□□ -1.72
SPTA1-206ENST00000484520 TDRD15B5MCY1 1934 aaKnown RBP4.33□□□□□ -1.72
SPTA1-206ENST00000484520 A0A087WUV0 522 aaPredicted RBP4.33□□□□□ -1.72
SPTA1-206ENST00000484520 MAGEB16A2A368 324 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 HMGB1P1B2RPK0 211 aaPredicted RBP4.33□□□□□ -1.72
SPTA1-206ENST00000484520 MSI1O43347 362 aaKnown RBP4.33□□□□□ -1.72
SPTA1-206ENST00000484520 TCEA3O75764 348 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 SUN1O94901 812 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 ASMTLO95671 621 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 MOCS2O96007 188 aaPredicted RBP4.33□□□□□ -1.72
SPTA1-206ENST00000484520 APRTP07741 180 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 FOSL2P15408 326 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 NFKBIAP25963 317 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 IVDP26440 423 aa4.33□□□□□ -1.72
SPTA1-206ENST00000484520 GABRR2P28476 465 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms