RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 TNFSF15O95150 251 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 GAS8O95995 478 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 IDSP22304 550 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 RPL10P27635 214 aaKnown RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 MLLT3P42568 568 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 CDH17Q12864 832 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 C19orf48Q6RUI8 117 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 PPP1R21Q6ZMI0 780 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 LRRC69Q6ZNQ3 347 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 DET1Q7L5Y6 550 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 SNX20Q7Z614 316 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 AMZ2Q86W34 360 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 GLIS1Q8NBF1 620 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 OR52K1Q8NGK4 314 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 DPYSL5Q9BPU6 564 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 FAM96AQ9H5X1 160 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 NLE1Q9NVX2 485 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 SCHIP1Q9P0W5 487 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 DRG1Q9Y295 367 aaKnown RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 JRKLQ9Y4A0 524 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 LOXL2Q9Y4K0 774 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 SLC30A1Q9Y6M5 507 aa18.42■□□□□ 0.54
HSPG2-210ENST00000481644 ANKRD11Q6UB99 2663 aaPredicted RBP18.42■□□□□ 0.54
HSPG2-210ENST00000481644 AGAP14A8MT82 685 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 ZSCAN12O43309 604 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 DUX1O43812 170 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 SUN1O94901 812 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 ITGA2BP08514 1039 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 JMJD7P0C870 316 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 ZSCAN5DPP0CG00 497 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 HGFP14210 728 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 XRCC1P18887 633 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 PBLDP30039 288 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 MC4RP32245 332 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 CSF2RBP32927 897 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 DRG2P55039 364 aaKnown RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 UBE2IP63279 158 aaKnown RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 DMPKQ09013 629 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 SQSTM1Q13501 440 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 SEMA5AQ13591 1074 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 FNBP1LQ5T0N5 605 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 WASH2PQ6VEQ5 465 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 ZNF574Q6ZN55 896 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 GSTA5Q7RTV2 222 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 TRIM48Q8IWZ4 208 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 REXO1L1PQ8IX06 675 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 ZNF248Q8NDW4 579 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 OR4D9Q8NGE8 314 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 STYXQ8WUJ0 223 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 TMEM159Q96B96 161 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 DCUN1D1Q96GG9 259 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 ZNF514Q96K75 400 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 CCDC74BQ96LY2 380 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 CMKLR1Q99788 373 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 WASH6PQ9NQA3 447 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 HOMER3Q9NSC5 361 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 AKAP7Q9P0M2 348 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 DNMT3AQ9Y6K1 912 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-210ENST00000481644 CELSR3Q9NYQ7 3312 aa18.41■□□□□ 0.54
HSPG2-210ENST00000481644 PKD1L2Q7Z442 2459 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 IGHV5-10-1A0A0J9YXX1 117 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 CDRT15L2A8MXV6 281 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 H7C0S8 307 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 VIPP01282 170 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 RALBP11234 206 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 HOXB3P14651 431 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-210ENST00000481644 BRAFP15056 766 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 RPL22P35268 128 aaKnown RBP18.4■□□□□ 0.54
HSPG2-210ENST00000481644 ABCG1P45844 678 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 MAPK9P45984 424 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 LIMK2P53671 638 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 EPHA4P54764 986 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 CFHR1Q03591 330 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 CCDC173Q0VFZ6 552 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 COL28A1Q2UY09 1125 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 GPR33Q49SQ1 333 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 ZRANB3Q5FWF4 1079 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 AGAP9Q5VTM2 703 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 ABRAXAS1Q6UWZ7 409 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 NXPE1Q8N323 547 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 SGF29Q96ES7 293 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 NAF1Q96HR8 494 aaKnown RBP18.4■□□□□ 0.54
HSPG2-210ENST00000481644 COPS8Q99627 209 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 ZNF624Q9P2J8 865 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-210ENST00000481644 PISDQ9UG56 409 aa18.4■□□□□ 0.54
HSPG2-210ENST00000481644 ZZEF1O43149 2961 aa18.39■□□□□ 0.54
HSPG2-210ENST00000481644 BPTFQ12830 3046 aa18.39■□□□□ 0.54
HSPG2-210ENST00000481644 CCDC78A2IDD5 438 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 MROH6A6NGR9 719 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 CFAP99D6REC4 459 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 APRTP07741 180 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 ITPKBP27987 946 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 SLC19A1P41440 591 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 GRIA1P42261 906 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 HALP42357 657 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 KCNJ1P48048 391 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 TRA2AQ13595 282 aaKnown RBP eCLIP18.39■□□□□ 0.53
HSPG2-210ENST00000481644 C16orf72Q14CZ0 275 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms