RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SOWAHDA6NJG2 315 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 HACD1B0YJ81 288 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 GAPDHSO14556 408 aaPredicted RBP18.24■□□□□ 0.51
CLK1-211ENST00000481641 AMD1P17707 334 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 IDSP22304 550 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 CYLC1P35663 651 aaPredicted RBP18.24■□□□□ 0.51
CLK1-211ENST00000481641 SPAM1P38567 509 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 TNNT3P45378 269 aaPredicted RBP18.24■□□□□ 0.51
CLK1-211ENST00000481641 LEPRP48357 1165 aaKnown RBP18.24■□□□□ 0.51
CLK1-211ENST00000481641 SEPHS1P49903 392 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 CTSCP53634 463 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 MPP3Q13368 585 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 GTF2H3Q13889 308 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 PPP2R5EQ16537 467 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 ABRAXAS1Q6UWZ7 409 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 CEACAM20Q6UY09 585 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 PLXDC1Q8IUK5 500 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 CCDC170Q8IYT3 715 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 UNC5BQ8IZJ1 945 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 RASGEF1AQ8N9B8 481 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 AVL9Q8NBF6 648 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 NAT14Q8WUY8 206 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 C9orf72Q96LT7 481 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 VAT1Q99536 393 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 FICDQ9BVA6 458 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 EPB41L1Q9H4G0 881 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 UCK1Q9HA47 277 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 FBXO8Q9NRD0 319 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.24■□□□□ 0.51
CLK1-211ENST00000481641 DUSP10Q9Y6W6 482 aa18.24■□□□□ 0.51
CLK1-211ENST00000481641 LOC101059948A0A1B0GTJ6 334 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 CAPN5O15484 640 aaPredicted RBP18.23■□□□□ 0.51
CLK1-211ENST00000481641 SLC28A2O43868 658 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 KIF1CO43896 1103 aaKnown RBP18.23■□□□□ 0.51
CLK1-211ENST00000481641 APOC2P02655 101 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 C9P02748 559 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 ITGB6P18564 788 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 HLA-DPA1P20036 260 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 GPR18Q14330 331 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 CCDC181Q5TID7 509 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 AADACL2Q6P093 401 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 FAM83HQ6ZRV2 1179 aaPredicted RBP18.23■□□□□ 0.51
CLK1-211ENST00000481641 RSC1A1Q92681 617 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 CXorf40BQ96DE9 158 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 TTC25Q96NG3 672 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 TEFMQ96QE5 360 aaKnown RBP18.23■□□□□ 0.51
CLK1-211ENST00000481641 APOL2Q9BQE5 337 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 FSD1LQ9BXM9 530 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 SLC40A1Q9NP59 571 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 SIDT1Q9NXL6 827 aaKnown RBP18.23■□□□□ 0.51
CLK1-211ENST00000481641 HACD3Q9P035 362 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 TRHDEQ9UKU6 1024 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 PSMD13Q9UNM6 376 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 ARL5AQ9Y689 179 aa18.23■□□□□ 0.51
CLK1-211ENST00000481641 GLYATL1P3A0A0U1RQE8 302 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 MACROD2A1Z1Q3 448 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 OR2AG2A6NM03 316 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 POLR1CO15160 346 aaPredicted RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 POP7O75817 140 aaKnown RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 STK17BO94768 372 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 SH3BP2P78314 561 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 OTUD4Q01804 1114 aaKnown RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 FOXM1Q08050 763 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 XRCC4Q13426 336 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 GPRC6AQ5T6X5 926 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 AGAP9Q5VTM2 703 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 TMEM220Q6QAJ8 160 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 WASH2PQ6VEQ5 465 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 PRICKLE2Q7Z3G6 844 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 NLGN4XQ8N0W4 816 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 NLGN4YQ8NFZ3 816 aaPredicted RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 BRSK1Q8TDC3 778 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 GBA3Q9H227 469 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 WASH6PQ9NQA3 447 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 POT1Q9NUX5 634 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 REXO2Q9Y3B8 237 aaKnown RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 PKP3Q9Y446 797 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 KCTD3Q9Y597 815 aa18.22■□□□□ 0.51
CLK1-211ENST00000481641 EPN1Q9Y6I3 576 aaPredicted RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 TLN1Q9Y490 2541 aaKnown RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 ZNF106Q9H2Y7 1883 aaKnown RBP18.22■□□□□ 0.51
CLK1-211ENST00000481641 STX7O15400 261 aaKnown RBP18.21■□□□□ 0.51
CLK1-211ENST00000481641 NKX2-8O15522 239 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 NDUFA10O95299 355 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 ANKRD34CP0C6C1 535 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 PBLDP30039 288 aaPredicted RBP18.21■□□□□ 0.51
CLK1-211ENST00000481641 CTNNA1P35221 906 aaKnown RBP18.21■□□□□ 0.51
CLK1-211ENST00000481641 ZNF75DP51815 510 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 GEMP55040 296 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 NAP1L1P55209 391 aaKnown RBP18.21■□□□□ 0.51
CLK1-211ENST00000481641 NFE2L1Q14494 772 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 LDLRAP1Q5SW96 308 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 ZDHHC20Q5W0Z9 365 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 FAM92BQ6ZTR7 304 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 DET1Q7L5Y6 550 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 AMZ2Q86W34 360 aa18.21■□□□□ 0.51
CLK1-211ENST00000481641 BEND7Q8N7W2 519 aaPredicted RBP18.21■□□□□ 0.51
CLK1-211ENST00000481641 DDHD1Q8NEL9 900 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms