RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 LRP8Q14114 963 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 NFE2L1Q14494 772 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 LONRF2Q1L5Z9 754 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 INSCQ1MX18 579 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 P3H1Q32P28 736 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 TBC1D25Q3MII6 688 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 FNBP1LQ5T0N5 605 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 PHF19Q5T6S3 580 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 PDPK2PQ6A1A2 396 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 DUS1LQ6P1R4 473 aaKnown RBP11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 TMEM220Q6QAJ8 160 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 LRRTM4Q86VH4 590 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 SPNS2Q8IVW8 549 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 TRIM58Q8NG06 486 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 GPR150Q8NGU9 434 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 CCDC74BQ96LY2 380 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 SRPK1Q96SB4 655 aaKnown RBP11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 FERMT1Q9BQL6 677 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 AP1M1Q9BXS5 423 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 ASB8Q9H765 288 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 LRRC40Q9H9A6 602 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 RAB6BQ9NRW1 208 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 OGFRQ9NZT2 677 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 CPNE7Q9UBL6 633 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 PSMD13Q9UNM6 376 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 CFAP20Q9Y6A4 193 aaKnown RBP11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 PRSS21Q9Y6M0 314 aa11.22□□□□□ -0.61
RAPGEF1-207ENST00000481260 ZNF106Q9H2Y7 1883 aaKnown RBP11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 MROH6A6NGR9 719 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 C2orf81A6NN90 581 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 KMOO15229 486 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 FANCGO15287 622 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 VEGFDO43915 354 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 F3P13726 295 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 PNLIPP16233 465 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 FASLGP48023 281 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 VPS41P49754 854 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 PPP1CAP62136 330 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 HHEXQ03014 270 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 SEMA5AQ13591 1074 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 CCNG2Q16589 344 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 SPDYE1Q8NFV5 336 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 OR6C4Q8NGE1 309 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 SLC46A1Q96NT5 459 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 TRIM56Q9BRZ2 755 aaKnown RBP11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 TIMM29Q9BSF4 260 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 NLE1Q9NVX2 485 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 SMOXQ9NWM0 555 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 KCNK4Q9NYG8 393 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 FOXJ2Q9P0K8 574 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 PISDQ9UG56 409 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 LOXL2Q9Y4K0 774 aa11.21□□□□□ -0.61
RAPGEF1-207ENST00000481260 KALRNO60229 2985 aa11.21□□□□□ -0.62
RAPGEF1-207ENST00000481260 CCDC187A0A096LP49 1063 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CCDC162PA2VCL2 907 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 AGAP14A8MT82 685 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 A8MU76 341 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 PDZK1P1A8MUH7 402 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CDRT15L2A8MXV6 281 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SUN1O94901 812 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 F7P08709 466 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 TYRP1P17643 537 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 AKT1P31749 480 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CCKBRP32239 447 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 ACTN2P35609 894 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CLCNKAP51800 687 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 GFERP55789 205 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 BIRC2Q13490 618 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SEMA3AQ14563 771 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 DBN1Q16643 649 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SNAP47Q5SQN1 464 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 LDLRAP1Q5SW96 308 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 ANKRD22Q5VYY1 191 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 NAPRTQ6XQN6 538 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 ZNF534Q76KX8 674 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 RAB11FIP2Q7L804 512 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SERPINA9Q86WD7 417 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 NXPE1Q8N323 547 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 C17orf53Q8N3J3 647 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 FBXO39Q8N4B4 442 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CLDN19Q8N6F1 224 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 OR13J1Q8NGT2 312 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 WDR36Q8NI36 951 aaKnown RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SNIP1Q8TAD8 396 aaKnown RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 DTX3LQ8TDB6 740 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 FGF11Q92914 225 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 LIN37Q96GY3 246 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CDKN2AIPNLQ96HQ2 116 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SLC38A3Q99624 504 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 SARS2Q9NP81 518 aaKnown RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 CASS4Q9NQ75 786 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 TTC7AQ9ULT0 858 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 PTPRQQ9UMZ3 2332 aa11.2□□□□□ -0.62
RAPGEF1-207ENST00000481260 A0A087WV48 116 aa11.19□□□□□ -0.62
RAPGEF1-207ENST00000481260 TRBV5-4A0A0C4DH59 114 aa11.19□□□□□ -0.62
RAPGEF1-207ENST00000481260 C9orf172C9J069 976 aa11.19□□□□□ -0.62
RAPGEF1-207ENST00000481260 PLD2O14939 933 aa11.19□□□□□ -0.62
RAPGEF1-207ENST00000481260 OR1I1O60431 355 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms