RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PQLC1Q8N2U9 271 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 DNAJB8Q8NHS0 232 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PCDH18Q9HCL0 1135 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 POLEQ07864 2286 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 LRRC10BA6NIK2 292 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 A8MX80 341 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 CALCAP01258 141 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 C8GP07360 202 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 ATF6P18850 670 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SMAD3P84022 425 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 METTL21CQ5VZV1 264 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 SLC43A3Q8NBI5 491 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 HCAR2Q8TDS4 363 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 STYXQ8WUJ0 223 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PLD4Q96BZ4 506 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 MOV10Q9HCE1 1003 aaKnown RBP9.47□□□□□ -0.89
VEGFA-212ENST00000480614 CDH7Q9ULB5 785 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 PCDHGA3Q9Y5H0 932 aa9.47□□□□□ -0.89
VEGFA-212ENST00000480614 DDTLA6NHG4 134 aaPredicted RBP9.46□□□□□ -0.89
VEGFA-212ENST00000480614 PPP3CAQ08209 521 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 LDLRAP1Q5SW96 308 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CHRDL2Q6WN34 429 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 PNLDC1Q8NA58 520 aaKnown RBP9.46□□□□□ -0.89
VEGFA-212ENST00000480614 IRGQQ8WZA9 623 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 ROPN1LQ96C74 230 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 SCGB3A2Q96PL1 93 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 RAB11FIP5Q9BXF6 653 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CHST7Q9NS84 486 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 SPATA31C2B4DYI2 1134 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 SLC9B1Q4ZJI4 515 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 MFSD5Q6N075 450 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 KCTD4Q8WVF5 259 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF639Q9UID6 485 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CARD8Q9Y2G2 431 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 EML1O00423 815 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CAPN15O75808 1086 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CCNB2O95067 398 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 KAT7O95251 611 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CNTN2Q02246 1040 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CXCL9Q07325 125 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 LLGL2Q6P1M3 1020 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 SIX5Q8N196 739 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 NATD1Q8N6N6 113 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 ANKFN1Q8N957 763 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 PRORSD1PA6NEY8 169 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 PAGE1O75459 146 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 AGR2O95994 175 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 SRPRAP08240 638 aaKnown RBP9.46□□□□□ -0.89
VEGFA-212ENST00000480614 CLPTM1LQ96KA5 538 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 TTYH1Q9H313 450 aaPredicted RBP9.46□□□□□ -0.89
VEGFA-212ENST00000480614 RC3H2Q9HBD1 1191 aaKnown RBP9.46□□□□□ -0.89
VEGFA-212ENST00000480614 MED11Q9P086 117 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 TCRBV5S4A2TA0A5A2 114 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 ELOVL7A1L3X0 281 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 DDX6P26196 483 aaKnown RBP eCLIP9.46□□□□□ -0.898e-8■□□□□ 10.4
VEGFA-212ENST00000480614 HNF4AP41235 474 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 LAPTM4BQ86VI4 370 aa9.46□□□□□ -0.89
VEGFA-212ENST00000480614 FCRL2Q96LA5 508 aaPredicted RBP9.46□□□□□ -0.89
VEGFA-212ENST00000480614 ENTPD5O75356 428 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 PEPDP12955 493 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 LSM3P62310 102 aaKnown RBP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 ACAP2Q15057 778 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 PGAM4Q8N0Y7 254 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 MKL1Q969V6 931 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 IMP3Q9NV31 184 aaKnown RBP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 ZNF490Q9ULM2 529 aaPredicted RBP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 NDUFV1P49821 464 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 LCP2Q13094 533 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 POM121L1PQ3SYA9 428 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 SPAG16Q8N0X2 631 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 ITFG2Q969R8 447 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 EHD1Q9H4M9 534 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 ANKRA2Q9H9E1 313 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 SSU72Q9NP77 194 aaKnown RBP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 FAM172BPA6NC97 362 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 DCLK1O15075 740 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 HCN1O60741 890 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 TUSC3Q13454 348 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 TMPRSS11BQ86T26 416 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 ARL10Q8N8L6 244 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 C2orf15Q8WU43 125 aaKnown RBP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 TP53INP1Q96A56 240 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 FADS3Q9Y5Q0 445 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 SMCO3A2RU48 225 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 HNRNPLP14866 589 aaKnown RBP eCLIP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 BLKP51451 505 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 LRRC55Q6ZSA7 311 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 SLC26A9Q7LBE3 791 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 SGCDQ92629 289 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 TBC1D24Q9ULP9 559 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 A0A0J9YYE9 177 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 VSTM5A8MXK1 200 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 WNT10BO00744 389 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 PIK3CBP42338 1070 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 PSMD8P48556 350 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 MAP2K5Q13163 448 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 CXorf57Q6NSI4 855 aaKnown RBP9.46□□□□□ -0.9
VEGFA-212ENST00000480614 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.9
VEGFA-212ENST00000480614 TRAPPC12Q8WVT3 735 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms