RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 PARGQ86W56 976 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 NRROSQ86YC3 692 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 GATAD2AQ86YP4 633 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 HID1Q8IV36 788 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CLDN19Q8N6F1 224 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SAP25Q8TEE9 199 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SKA1Q96BD8 255 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 LRRC39Q96DD0 335 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 ZDHHC5Q9C0B5 715 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 TMEM168Q9H0V1 697 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 DNAAF2Q9NVR5 837 aaKnown RBP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 KLQ9UEF7 1012 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 ZC3H7BQ9UGR2 993 aaKnown RBP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 NFU1Q9UMS0 254 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 PRSS21Q9Y6M0 314 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 DGKBQ9Y6T7 804 aa12.08□□□□□ -0.48
TRA2B-212ENST00000480461 V9GYY5 206 aaPredicted RBP12.08□□□□□ -0.48
TRA2B-212ENST00000480461 SH3BP5O60239 455 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 NUAK1O60285 661 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 PIAS1O75925 651 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 CDK14O94921 469 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ASMTLO95671 621 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 C1QAP02745 245 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 POLBP06746 335 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 IVLP07476 585 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ERVK-10P10266 1014 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ITGALP20701 1170 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 DGKAP23743 735 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ACRV1P26436 265 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 HTR1BP28222 390 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 SSTR1P30872 391 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 MAGEA4P43358 317 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 PRAMEP78395 509 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 PPARDQ03181 441 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 TRIP6Q15654 476 aaKnown RBP12.07□□□□□ -0.48
TRA2B-212ENST00000480461 NEPROQ6NW34 567 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 AFTPHQ6ULP2 937 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 IL27RAQ6UWB1 636 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 CENPUQ71F23 418 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 SFTPA2Q8IWL1 248 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 IFT20Q8IY31 132 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ZBED8Q8IZ13 594 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 PHACTR4Q8IZ21 702 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 GPR150Q8NGU9 434 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 GDAP1Q8TB36 358 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 C9orf72Q96LT7 481 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ZDHHC3Q9NYG2 299 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 MOCS1Q9NZB8 636 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 VPS18Q9P253 973 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 SLC17A6Q9P2U8 582 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 GULP1Q9UBP9 304 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 ZNHIT2Q9UHR6 403 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 MOSPD1Q9UJG1 213 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 TENM4Q6N022 2769 aa12.07□□□□□ -0.48
TRA2B-212ENST00000480461 PRR19A6NJB7 356 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 NDC80O14777 642 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 EIF3HO15372 352 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRA2B-212ENST00000480461 PIAS2O75928 621 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 S1PR4O95977 384 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 TNFP01375 233 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 KELP23276 732 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 GABRB3P28472 473 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 GNPDA1P46926 289 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 CTBP1Q13363 440 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 LONRF1Q17RB8 773 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 ERCC6LQ2NKX8 1250 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 FASTKD1Q53R41 847 aaKnown RBP12.06□□□□□ -0.48
TRA2B-212ENST00000480461 HSP90AA5PQ58FG0 334 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 PRRT3Q5FWE3 981 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 SPANXN3Q5MJ09 141 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 LDLRAP1Q5SW96 308 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 TMEM220Q6QAJ8 160 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 DET1Q7L5Y6 550 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 CCDC25Q86WR0 208 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 PHYKPLQ8IUZ5 450 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 NAXDQ8IW45 347 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 DENND6AQ8IWF6 608 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 BEND7Q8N7W2 519 aaPredicted RBP12.06□□□□□ -0.48
TRA2B-212ENST00000480461 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRA2B-212ENST00000480461 PYROXD1Q8WU10 500 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 CRELD1Q96HD1 420 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 NAT9Q9BTE0 207 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 LRRC61Q9BV99 259 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 CARS2Q9HA77 564 aaKnown RBP12.06□□□□□ -0.48
TRA2B-212ENST00000480461 LRRC4CQ9HCJ2 640 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 SMYD2Q9NRG4 433 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 CATSPERZQ9NTU4 200 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 C20orf96Q9NUD7 363 aaPredicted RBP12.06□□□□□ -0.48
TRA2B-212ENST00000480461 CRLS1Q9UJA2 301 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 BTBD3Q9Y2F9 522 aa12.06□□□□□ -0.48
TRA2B-212ENST00000480461 OR2AG2A6NM03 316 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CXorf49A8MYA2 514 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms